RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.32□□□□□ -0.28
PMS1-204ENST00000409823 HIDE1A8MVS5 230 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 LCA5LO95447 670 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 FAM163BP0C2L3 166 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 DSG1Q02413 1049 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 MLLT1Q03111 559 aaPredicted RBP13.32□□□□□ -0.28
PMS1-204ENST00000409823 PLPP4Q5VZY2 271 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 FAM35AQ86V20 835 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 SPATA2LQ8IUW3 424 aaPredicted RBP13.32□□□□□ -0.28
PMS1-204ENST00000409823 TMEM35BQ8NCS4 154 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 PIK3R5Q8WYR1 880 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 HNRNPABQ99729 332 aaKnown RBP13.32□□□□□ -0.28
PMS1-204ENST00000409823 CRISPLD1Q9H336 500 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 SLC28A3Q9HAS3 691 aa13.32□□□□□ -0.28
PMS1-204ENST00000409823 WDR27A2RRH5 827 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 GJB6O95452 261 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 IRS1P35568 1242 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 KRT83P78385 493 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 PLCB3Q01970 1234 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 ROR1Q01973 937 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 PTPN20Q4JDL3 420 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 ARHGAP17Q68EM7 881 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 ACAD10Q6JQN1 1059 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 CLEC20AQ6ZU45 233 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 ANKRD52Q8NB46 1076 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 SPPL3Q8TCT6 385 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 TGS1Q96RS0 853 aaKnown RBP13.31□□□□□ -0.28
PMS1-204ENST00000409823 IRX2Q9BZI1 471 aaPredicted RBP13.31□□□□□ -0.28
PMS1-204ENST00000409823 SYNCQ9H7C4 482 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 MSRAQ9UJ68 235 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 NENFQ9UMX5 172 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 GBF1Q92538 1859 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 MACROD2A1Z1Q3 448 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 H7C4K7 107 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 RFXAPO00287 272 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 TBC1D4O60343 1298 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 RTN2O75298 545 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 CXCL14O95715 111 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 FAM200BP0CF97 657 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 GPR15P49685 360 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 CENPCQ03188 943 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 ADCY1Q08828 1119 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 IFRD2Q12894 506 aaPredicted RBP13.31□□□□□ -0.28
PMS1-204ENST00000409823 DUSP4Q13115 394 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 PDCLQ13371 301 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 PTPN14Q15678 1187 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 PKDCCQ504Y2 493 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 SCN4BQ8IWT1 228 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
PMS1-204ENST00000409823 ARHGEF26Q96DR7 871 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 DNAI2Q9GZS0 605 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 ZBP1Q9H171 429 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 ADAM22Q9P0K1 906 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 MTRRQ9UBK8 725 aa13.31□□□□□ -0.28
PMS1-204ENST00000409823 F8VP50 259 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 TEX28O15482 410 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 NPR3P17342 541 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 GRIK1P39086 918 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 CAMK1Q14012 370 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 DDR2Q16832 855 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 ZSCAN30Q86W11 494 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 ERICH1Q86X53 443 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 SCUBE3Q8IX30 993 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 DCP1BQ8IZD4 617 aaKnown RBP13.3□□□□□ -0.28
PMS1-204ENST00000409823 SPATA18Q8TC71 538 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 SLC35F5Q8WV83 523 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 PPP1R13BQ96KQ4 1090 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 SEPT5Q99719 369 aaPredicted RBP13.3□□□□□ -0.28
PMS1-204ENST00000409823 SMOQ99835 787 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 HERC2P3Q9BVR0 1158 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 DUSP16Q9BY84 665 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 MIS12Q9H081 205 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 ISCUQ9H1K1 167 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 LHX5Q9H2C1 402 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 SALL4Q9UJQ4 1053 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 GUCA1BQ9UMX6 200 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 PAXBP1Q9Y5B6 917 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 COL6A3P12111 3177 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 EPOPA6NHQ4 379 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 OR6C75A6NL08 312 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 E5RJQ4 531 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 BUB1O43683 1085 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 VNN2O95498 520 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 CNPP09543 421 aaKnown RBP13.3□□□□□ -0.28
PMS1-204ENST00000409823 H2AFZP0C0S5 128 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 GZMAP12544 262 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 LCP1P13796 627 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 RRM1P23921 792 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 BMP8BP34820 402 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 VAV2P52735 878 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 BCAT1P54687 386 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 BST2Q10589 180 aaKnown RBP13.3□□□□□ -0.28
PMS1-204ENST00000409823 H2AFVQ71UI9 128 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 GPRIN1Q7Z2K8 1008 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 PIGZQ86VD9 579 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 GDPD5Q8WTR4 605 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 NDRG1Q92597 394 aaKnown RBP13.3□□□□□ -0.28
PMS1-204ENST00000409823 ZNF653Q96CK0 615 aa13.3□□□□□ -0.28
PMS1-204ENST00000409823 GABBR2O75899 941 aa13.29□□□□□ -0.28
PMS1-204ENST00000409823 LSM8O95777 96 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms