RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SPATA17Q96L03 361 aa33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 ASB16Q96NS5 453 aa33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 KXD1Q9BQD3 176 aa33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 SLITRK6Q9H5Y7 841 aa33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 HELZP42694 1942 aaKnown RBP33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 ATP8B3O60423 1300 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 F8VP50 259 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 P4HA2O15460 535 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 AFPP02771 609 aaKnown RBP33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 CCDC130P13994 396 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 FCARP24071 287 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 CYP4F8P98187 520 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TPD52L1Q16890 204 aaPredicted RBP33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TMEM31Q5JXX7 168 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 PAQR9Q6ZVX9 377 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TMEM150AQ86TG1 271 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 FUKQ8N0W3 1084 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 MYRFLQ96LU7 910 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 CEP295NLQ96MC4 621 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 GCNAQ96QF7 691 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 NT5C1AQ9BXI3 368 aa33.13■■■□□ 2.89
TRAF3IP1-203ENST00000409739 ANXA13P27216 316 aa33.12■■■□□ 2.89
TRAF3IP1-203ENST00000409739 C12orf29Q8N999 325 aa33.12■■■□□ 2.89
TRAF3IP1-203ENST00000409739 C8orf48Q96LL4 319 aa33.12■■■□□ 2.89
TRAF3IP1-203ENST00000409739 MED10Q9BTT4 135 aa33.12■■■□□ 2.89
TRAF3IP1-203ENST00000409739 GPR88Q9GZN0 384 aa33.12■■■□□ 2.89
TRAF3IP1-203ENST00000409739 THAP9Q9H5L6 903 aa33.12■■■□□ 2.89
TRAF3IP1-203ENST00000409739 CISHQ9NSE2 258 aa33.12■■■□□ 2.89
TRAF3IP1-203ENST00000409739 FAM49BQ9NUQ9 324 aa33.12■■■□□ 2.89
TRAF3IP1-203ENST00000409739 F11P03951 625 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 CETN1Q12798 172 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 LRMPQ12912 555 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 CUL2Q13617 745 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 CT47A1Q5JQC4 288 aaPredicted RBP33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 GPR158Q5T848 1215 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TTC39CQ8N584 583 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 LMO3Q8TAP4 145 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 ZSCAN18Q8TBC5 510 aaPredicted RBP33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 SMARCD2Q92925 531 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 ASIC4Q96FT7 647 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 SMARCD1Q96GM5 515 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 FAM124BQ9H5Z6 455 aaPredicted RBP33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 KRT82Q9NSB4 513 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TMEM63CQ9P1W3 806 aa33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 UXTQ9UBK9 157 aaPredicted RBP33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 KIF26AQ9ULI4 1882 aaPredicted RBP33.11■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TMEM221A6NGB7 291 aa33.1■■■□□ 2.89
TRAF3IP1-203ENST00000409739 M0R296 226 aa33.1■■■□□ 2.89
TRAF3IP1-203ENST00000409739 ECI2O75521 394 aa33.1■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TADA3O75528 432 aa33.1■■■□□ 2.89
TRAF3IP1-203ENST00000409739 ARHGAP15Q53QZ3 475 aa33.1■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TANGO2Q6ICL3 276 aa33.1■■■□□ 2.89
TRAF3IP1-203ENST00000409739 CREBRFQ8IUR6 639 aa33.1■■■□□ 2.89
TRAF3IP1-203ENST00000409739 SLC2A14Q8TDB8 520 aa33.1■■■□□ 2.89
TRAF3IP1-203ENST00000409739 ELSPBP1Q96BH3 223 aa33.1■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TICRRQ7Z2Z1 1910 aa33.09■■■□□ 2.89
TRAF3IP1-203ENST00000409739 SRFP11831 508 aa33.09■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TRIM21P19474 475 aaKnown RBP33.09■■■□□ 2.89
TRAF3IP1-203ENST00000409739 ZNF394Q53GI3 561 aa33.09■■■□□ 2.89
TRAF3IP1-203ENST00000409739 DENND5BQ6ZUT9 1274 aa33.09■■■□□ 2.89
TRAF3IP1-203ENST00000409739 NT5C1BQ96P26 610 aa33.09■■■□□ 2.89
TRAF3IP1-203ENST00000409739 LRFN3Q9BTN0 628 aa33.09■■■□□ 2.89
TRAF3IP1-203ENST00000409739 PLA2G2FQ9BZM2 168 aa33.09■■■□□ 2.89
TRAF3IP1-203ENST00000409739 ZFP14Q9HCL3 533 aa33.09■■■□□ 2.89
TRAF3IP1-203ENST00000409739 USP46P62068 366 aa33.08■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TASP1Q9H6P5 420 aa33.08■■■□□ 2.89
TRAF3IP1-203ENST00000409739 TRPV4Q9HBA0 871 aa33.08■■■□□ 2.89
TRAF3IP1-203ENST00000409739 DMAP1Q9NPF5 467 aaPredicted RBP33.08■■■□□ 2.89
TRAF3IP1-203ENST00000409739 COL4A2P08572 1712 aa33.08■■■□□ 2.89
TRAF3IP1-203ENST00000409739 NCANO14594 1321 aa33.07■■■□□ 2.88
TRAF3IP1-203ENST00000409739 PRR33A8MZF0 331 aa33.07■■■□□ 2.88
TRAF3IP1-203ENST00000409739 AP1G2O75843 785 aa33.07■■■□□ 2.88
TRAF3IP1-203ENST00000409739 TBXAS1P24557 533 aaPredicted RBP33.07■■■□□ 2.88
TRAF3IP1-203ENST00000409739 SASS6Q6UVJ0 657 aa33.07■■■□□ 2.88
TRAF3IP1-203ENST00000409739 FAM114A1Q8IWE2 563 aa33.07■■■□□ 2.88
TRAF3IP1-203ENST00000409739 UBR7Q8N806 425 aa33.07■■■□□ 2.88
TRAF3IP1-203ENST00000409739 KCNK16Q96T55 309 aa33.07■■■□□ 2.88
TRAF3IP1-203ENST00000409739 TTLL2Q9BWV7 592 aa33.07■■■□□ 2.88
TRAF3IP1-203ENST00000409739 KMT2EQ8IZD2 1858 aa33.07■■■□□ 2.88
TRAF3IP1-203ENST00000409739 MTIF2P46199 727 aaKnown RBP33.06■■■□□ 2.88
TRAF3IP1-203ENST00000409739 RAD23BP54727 409 aa33.06■■■□□ 2.88
TRAF3IP1-203ENST00000409739 SLC4A11Q8NBS3 891 aa33.06■■■□□ 2.88
TRAF3IP1-203ENST00000409739 CYFIP2Q96F07 1278 aa33.06■■■□□ 2.88
TRAF3IP1-203ENST00000409739 HNRNPABQ99729 332 aaKnown RBP33.06■■■□□ 2.88
TRAF3IP1-203ENST00000409739 DNAI2Q9GZS0 605 aa33.06■■■□□ 2.88
TRAF3IP1-203ENST00000409739 CFHP08603 1231 aa33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 ADORA2BP29275 332 aa33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 VIPR2P41587 438 aa33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 YWHAEP62258 255 aaKnown RBP33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 STX1AQ16623 288 aa33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 C11orf57Q6ZUT1 292 aaPredicted RBP33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 HFE2Q6ZVN8 426 aa33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 ARID3BQ8IVW6 561 aaPredicted RBP33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 PPM1KQ8N3J5 372 aa33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 EHBP1Q8NDI1 1231 aa33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 ZMIZ2Q8NF64 920 aa33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 MRPS31Q92665 395 aaKnown RBP33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 SMOQ99835 787 aa33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 SLC46A2Q9BY10 475 aa33.05■■■□□ 2.88
TRAF3IP1-203ENST00000409739 INTS2Q9H0H0 1204 aaKnown RBP33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms