RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CXorf36Q9H7Y0 433 aa5.09□□□□□ -1.59
PMS1-203ENST00000409593 ZSCAN32Q9NX65 697 aa5.09□□□□□ -1.59
PMS1-203ENST00000409593 COX11Q9Y6N1 276 aa5.09□□□□□ -1.59
PMS1-203ENST00000409593 MYO1FO00160 1098 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 FESP07332 822 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 ZKSCAN1P17029 563 aaPredicted RBP5.08□□□□□ -1.6
PMS1-203ENST00000409593 LIPAP38571 399 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 ALDH9A1P49189 494 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 ZIK1Q3SY52 487 aaPredicted RBP5.08□□□□□ -1.6
PMS1-203ENST00000409593 PLA1AQ53H76 456 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 RNF220Q5VTB9 566 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 DTX2Q86UW9 622 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 MESP1Q9BRJ9 268 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 DPH1Q9BZG8 443 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 ZNF518BQ9C0D4 1074 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 SMURF2Q9HAU4 748 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 PRDM11Q9NQV5 511 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 OBP2AQ9NY56 170 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 STK32BQ9NY57 414 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 OGDHLQ9ULD0 1010 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 COL11A2P13942 1736 aaPredicted RBP5.08□□□□□ -1.6
PMS1-203ENST00000409593 LRRC3CA6NJW4 275 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 MASP2O00187 686 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 MGEA5O60502 916 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 C1QL1O75973 258 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 ERBB2P04626 1255 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 DRD4P21917 467 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 PCSK6P29122 969 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 ADORA2AP29274 412 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 PDE6CP51160 858 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 PDE1AP54750 535 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 DARS2Q6PI48 645 aaKnown RBP5.08□□□□□ -1.6
PMS1-203ENST00000409593 SRGAP1Q7Z6B7 1085 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 LRRC71Q8N4P6 559 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 GLG1Q92896 1179 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 SARAFQ96BY9 339 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 R3HDM4Q96D70 268 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 TIMP4Q99727 224 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 LRRC27Q9C0I9 530 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 ARPP21Q9UBL0 812 aaPredicted RBP5.08□□□□□ -1.6
PMS1-203ENST00000409593 CCNL1Q9UK58 526 aaPredicted RBP5.08□□□□□ -1.6
PMS1-203ENST00000409593 TBC1D30Q9Y2I9 924 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 WNT6Q9Y6F9 365 aa5.08□□□□□ -1.6
PMS1-203ENST00000409593 MAP4K4O95819 1239 aaPredicted RBP5.07□□□□□ -1.6
PMS1-203ENST00000409593 ZBED1O96006 694 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 IL6RP08887 468 aaPredicted RBP5.07□□□□□ -1.6
PMS1-203ENST00000409593 PEX2P28328 305 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 CD38P28907 300 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 FAM193AP78312 1265 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 GBX1Q14549 363 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 C3orf38Q5JPI3 329 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 ZNF575Q86XF7 245 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 GAS2L3Q86XJ1 694 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 BPIFB1Q8TDL5 484 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 OSCP1Q8WVF1 389 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 XAGE5Q8WWM1 108 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 BHMT2Q9H2M3 363 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 A1CFQ9NQ94 594 aaKnown RBP5.07□□□□□ -1.6
PMS1-203ENST00000409593 AFF4Q9UHB7 1163 aaKnown RBP5.07□□□□□ -1.6
PMS1-203ENST00000409593 PAXBP1Q9Y5B6 917 aa5.07□□□□□ -1.6
PMS1-203ENST00000409593 A1L4Q6 167 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 QSOX1O00391 747 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 GOLIM4O00461 696 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 FRS3O43559 492 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 RASSF9O75901 435 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 CSF1RP07333 972 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 JUPP14923 745 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 ENGP17813 658 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 WT1P19544 449 aaPredicted RBP5.06□□□□□ -1.6
PMS1-203ENST00000409593 CYP2C18P33260 490 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 DGKEP52429 567 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 POLD3Q15054 466 aaPredicted RBP5.06□□□□□ -1.6
PMS1-203ENST00000409593 CNGA2Q16280 664 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 SYCE2Q6PIF2 218 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 CHST15Q7LFX5 561 aaPredicted RBP5.06□□□□□ -1.6
PMS1-203ENST00000409593 OR56A3Q8NH54 315 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 TMEM171Q8WVE6 324 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 SPSB4Q96A44 273 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 STK31Q9BXU1 1019 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 SERTAD4Q9NUC0 356 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 ADAM21Q9UKJ8 722 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 HDAC9Q9UKV0 1011 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 PADI4Q9UM07 663 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 PCDHGB6Q9Y5F9 930 aa5.06□□□□□ -1.6
PMS1-203ENST00000409593 ISM1B1AKI9 464 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 H0YIZ8 118 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 PYCARD-AS1I3L0S3 204 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 HNRNPCP07910 306 aaKnown RBP eCLIP5.05□□□□□ -1.6
PMS1-203ENST00000409593 KCNA3P22001 575 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 ITPKBP27987 946 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 ATXN1P54253 815 aaKnown RBP5.05□□□□□ -1.6
PMS1-203ENST00000409593 MRPS21P82921 87 aaKnown RBP5.05□□□□□ -1.6
PMS1-203ENST00000409593 CACHD1Q5VU97 1274 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 SLC29A4Q7RTT9 530 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 NTN5Q8WTR8 489 aaPredicted RBP5.05□□□□□ -1.6
PMS1-203ENST00000409593 TIFAQ96CG3 184 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 PPP1R9BQ96SB3 815 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 ZNF287Q9HBT7 754 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 TRMT13Q9NUP7 481 aaKnown RBP5.05□□□□□ -1.6
PMS1-203ENST00000409593 SNX14Q9Y5W7 946 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms