RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 WDR91A4D1P6 747 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 EML1O00423 815 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 ESRRAP11474 423 aaPredicted RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 RGS4P49798 205 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 TAF11Q15544 211 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 KIAA0895Q8NCT3 520 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 C12orf42Q96LP6 360 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 INPP4AQ96PE3 977 aaPredicted RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 RBM15Q96T37 977 aaKnown RBP eCLIP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 AAR2Q9Y312 384 aaKnown RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 LRRC37A3O60309 1634 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 TFB1MQ8WVM0 346 aaKnown RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 CPB2Q96IY4 423 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 CCT8L2Q96SF2 557 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 TRIM45Q9H8W5 580 aaPredicted RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 ENTPD7Q9NQZ7 604 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 SNTG2Q9NY99 539 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 PEX19P40855 299 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 CARSP49589 748 aaKnown RBP17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 POLD3Q15054 466 aaPredicted RBP17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 ANKRD20A4Q4UJ75 823 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 ANKRD20A8PQ5CZ79 823 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 ANKRD20A2Q5SQ80 823 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 ANKRD20A1Q5TYW2 823 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 EGFL8Q99944 293 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 GOLPH3Q9H4A6 298 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 NDFIP2Q9NV92 336 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 SLC13A4Q9UKG4 626 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 UBA6A0AVT1 1052 aaPredicted RBP17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 NDUFS3O75489 264 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 PROSCO94903 275 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 HMBSP08397 361 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 SATB1Q01826 763 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 CDH18Q13634 790 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 FAM47EQ6ZV65 393 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 SLFN11Q7Z7L1 901 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 PPIL6Q8IXY8 311 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 EXD1Q8NHP7 514 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 IPPQ9Y573 584 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 A0A087X0T9 212 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 KLRG2A4D1S0 409 aaPredicted RBP17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 ATP9BO43861 1147 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 FAM228BP0C875 321 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 COBLL1Q53SF7 1204 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 MIPOL1Q8TD10 442 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 ZIM3Q96PE6 472 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 ERP44Q9BS26 406 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 NEU2Q9Y3R4 380 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 ZNF142P52746 1687 aaPredicted RBP17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 ROBO1Q9Y6N7 1651 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 GSTA4O15217 222 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 OPHN1O60890 802 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 SGPL1O95470 568 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 HMGCRP04035 888 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 YY1P25490 414 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 MTFR1Q15390 333 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 MAPRE2Q15555 327 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 EARS2Q5JPH6 523 aaKnown RBP17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 TMC7Q7Z402 723 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 NUDCD3Q8IVD9 361 aa17.49■□□□□ 0.39
PCDHA13-202ENST00000409494 BTG3Q14201 252 aaPredicted RBP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 DUSP28Q4G0W2 176 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 C11orf63Q6NUN7 778 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 CCDC60Q8IWA6 550 aaPredicted RBP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 SMARCD1Q96GM5 515 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 RPRD1AQ96P16 312 aaPredicted RBP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 AVENQ9NQS1 362 aaPredicted RBP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 CHST12Q9NRB3 414 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 ORC6Q9Y5N6 252 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 RAD51CO43502 376 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 GHRP10912 638 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 SESN2P58004 480 aaPredicted RBP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 IMPG1Q17R60 797 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 CLEC16AQ2KHT3 1053 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 PAPD7Q5XG87 772 aaKnown RBP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 JAMLQ86YT9 394 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 LZTR1Q8N653 840 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 ZNF473Q8WTR7 871 aaKnown RBP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 UBXN6Q9BZV1 441 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 SSTR3P32745 418 aaPredicted RBP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 HDAC4P56524 1084 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 MDM2Q00987 491 aaPredicted RBP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 HYIQ5T013 277 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 SLC35C1Q96A29 364 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 DNAJC6O75061 913 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 GRAP2O75791 330 aa17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 PLEKP08567 350 aaPredicted RBP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 DDX43Q9NXZ2 648 aaKnown RBP17.48■□□□□ 0.39
PCDHA13-202ENST00000409494 ATN1P54259 1190 aaPredicted RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 MRPS6P82932 125 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 TFDP3Q5H9I0 405 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 DPF3Q92784 378 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 PBXIP1Q96AQ6 731 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 THAP2Q9H0W7 228 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 KCND1Q9NSA2 647 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 TBKBP1A7MCY6 615 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 IGF2BP3O00425 579 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 LSP1P33241 339 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 CRYBB1P53674 252 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms