RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CAPN2P17655 700 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 PTPN7P35236 360 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 TAF6P49848 677 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 ZNF844Q08AG5 666 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 CYP4F22Q6NT55 531 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 GSTA5Q7RTV2 222 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 SH2D3CQ8N5H7 860 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 SNF8Q96H20 258 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 ASNSD1Q9NWL6 643 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 ERICH4A6NGS2 130 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 TMEM88BA6NKF7 163 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 SPTLC1O15269 473 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 ITIH2P19823 946 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 IL1R2P27930 398 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 ADCY8P40145 1251 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 CDKN2BP42772 138 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 SOX4Q06945 474 aaPredicted RBP21.77■■□□□ 1.08
USP39-203ENST00000409470 IFFO1Q0D2I5 559 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 ACAP1Q15027 740 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 SV2CQ496J9 727 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 KCNT1Q5JUK3 1230 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 TTC30AQ86WT1 665 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 ATP6V1G3Q96LB4 118 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 SNX25Q9H3E2 840 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 DPEP3Q9H4B8 488 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 TMBIM4Q9HC24 238 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 PCSK1NQ9UHG2 260 aa21.77■■□□□ 1.08
USP39-203ENST00000409470 PDGFRBP09619 1106 aa21.77■■□□□ 1.07
USP39-203ENST00000409470 SETSIPP0DME0 302 aa21.77■■□□□ 1.07
USP39-203ENST00000409470 GPD1P21695 349 aa21.77■■□□□ 1.07
USP39-203ENST00000409470 GNL1P36915 607 aaPredicted RBP21.77■■□□□ 1.07
USP39-203ENST00000409470 VPS41P49754 854 aa21.77■■□□□ 1.07
USP39-203ENST00000409470 LMNB2Q03252 620 aa21.77■■□□□ 1.07
USP39-203ENST00000409470 SLMAPQ14BN4 828 aa21.77■■□□□ 1.07
USP39-203ENST00000409470 DNAJC21Q5F1R6 531 aaKnown RBP21.77■■□□□ 1.07
USP39-203ENST00000409470 PMF1Q6P1K2 205 aa21.77■■□□□ 1.07
USP39-203ENST00000409470 APPL2Q8NEU8 664 aa21.77■■□□□ 1.07
USP39-203ENST00000409470 PABPC3Q9H361 631 aaKnown RBP21.77■■□□□ 1.07
USP39-203ENST00000409470 XPNPEP3Q9NQH7 507 aa21.77■■□□□ 1.07
USP39-203ENST00000409470 GDAP2Q9NXN4 497 aa21.77■■□□□ 1.07
USP39-203ENST00000409470 ST3GAL5Q9UNP4 418 aa21.77■■□□□ 1.07
USP39-203ENST00000409470 SCN10AQ9Y5Y9 1956 aa21.76■■□□□ 1.07
USP39-203ENST00000409470 TULP2O00295 520 aa21.76■■□□□ 1.07
USP39-203ENST00000409470 HCRTO43612 131 aa21.76■■□□□ 1.07
USP39-203ENST00000409470 LIASO43766 372 aa21.76■■□□□ 1.07
USP39-203ENST00000409470 ZNF143P52747 638 aaPredicted RBP21.76■■□□□ 1.07
USP39-203ENST00000409470 CACNB2Q08289 660 aaPredicted RBP21.76■■□□□ 1.07
USP39-203ENST00000409470 PKDCCQ504Y2 493 aa21.76■■□□□ 1.07
USP39-203ENST00000409470 HHIPL1Q96JK4 782 aa21.76■■□□□ 1.07
USP39-203ENST00000409470 LPIN3Q9BQK8 851 aa21.76■■□□□ 1.07
USP39-203ENST00000409470 DNAI2Q9GZS0 605 aa21.76■■□□□ 1.07
USP39-203ENST00000409470 HMGB1P1B2RPK0 211 aaPredicted RBP21.75■■□□□ 1.07
USP39-203ENST00000409470 PDGFRAP16234 1089 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 MIPP30301 263 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 SNX16P57768 344 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 BYSLQ13895 437 aaKnown RBP21.75■■□□□ 1.07
USP39-203ENST00000409470 DENND2CQ68D51 928 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 ARHGAP17Q68EM7 881 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 CCDC25Q86WR0 208 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 CCDC89Q8N998 374 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 KBTBD7Q8WVZ9 684 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 RXFP2Q8WXD0 754 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 HAUS1Q96CS2 278 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 DNPEPQ9ULA0 475 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 ZNF148Q9UQR1 794 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 HUS1O60921 280 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 GRAP2O75791 330 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 FGFR1P11362 822 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 EIF3BP55884 814 aaKnown RBP21.75■■□□□ 1.07
USP39-203ENST00000409470 KCTD6Q8NC69 237 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 WNT8BQ93098 351 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 PIWIL1Q96J94 861 aaKnown RBP21.75■■□□□ 1.07
USP39-203ENST00000409470 CNPY3Q9BT09 278 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 USP18Q9UMW8 372 aa21.75■■□□□ 1.07
USP39-203ENST00000409470 C3orf70A6NLC5 250 aaPredicted RBP21.74■■□□□ 1.07
USP39-203ENST00000409470 C2CD4BA6NLJ0 364 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 KDELR1P24390 212 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 LMO2P25791 158 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 IVDP26440 423 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 ADORA2BP29275 332 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 ITGA8P53708 1063 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 PDE4CQ08493 712 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 ZNF618Q5T7W0 954 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 SERINC5Q86VE9 423 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 HACE1Q8IYU2 909 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 SLC35F5Q8WV83 523 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 HSPH1Q92598 858 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 ZFP42Q96MM3 310 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 SLC4A5Q9BY07 1137 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 BCCIPQ9P287 314 aaKnown RBP eCLIP21.74■■□□□ 1.07
USP39-203ENST00000409470 ANAPC5Q9UJX4 755 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 NEU2Q9Y3R4 380 aa21.74■■□□□ 1.07
USP39-203ENST00000409470 PTGESO14684 152 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 ADAMTS4O75173 837 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 TRUB2O95900 331 aaKnown RBP21.73■■□□□ 1.07
USP39-203ENST00000409470 CHRNA1P02708 482 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 ASGR1P07306 291 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 RARGP13631 454 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 CCDC130P13994 396 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 LILRA4P59901 499 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms