RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 TBC1D25Q3MII6 688 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 PRAMEF19Q5SWL8 479 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 TMTC4Q5T4D3 741 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 ZNF793Q6ZN11 406 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 C11orf74Q86VG3 221 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 KIF18BQ86Y91 864 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 AOPEPQ8N6M6 819 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 TGFBRAP1Q8WUH2 860 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 CCDC17Q96LX7 622 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 INPP4AQ96PE3 977 aaPredicted RBP2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 FYTTD1Q96QD9 318 aaKnown RBP2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 SPRY4Q9C004 299 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 C6orf106Q9H6K1 298 aaPredicted RBP2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 ETAA1Q9NY74 926 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 SERTAD3Q9UJW9 196 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 PCDHA7Q9UN72 937 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 DNM3Q9UQ16 869 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 SH2B3Q9UQQ2 575 aa2.33□□□□□ -2.04
MIR548I3-201ENST00000408378 BAG4O95429 457 aaKnown RBP2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 ENPP1P22413 925 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 MLH1P40692 756 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 CPA2P48052 419 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 DSCR9P59020 149 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 KRTAP12-2P59991 146 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 PSMC1P62191 440 aaKnown RBP2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 ZNF750Q32MQ0 723 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 SLC9C1Q4G0N8 1177 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 SLC39A5Q6ZMH5 540 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 RFX8Q6ZV50 586 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 SFTPA1Q8IWL2 248 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 RHOT1Q8IXI2 618 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 ZNF398Q8TD17 642 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 PNISRQ8TF01 805 aaKnown RBP2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 GLG1Q92896 1179 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 SLC5A5Q92911 643 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 TMX3Q96JJ7 454 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 ZNF556Q9HAH1 456 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 GLOD4Q9HC38 313 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 SIRPGQ9P1W8 387 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 COG5Q9UP83 839 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 DOCK7Q96N67 2140 aa2.32□□□□□ -2.04
MIR548I3-201ENST00000408378 FOXN3O00409 490 aaPredicted RBP2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 CTIFO43310 598 aaKnown RBP2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 NDUFB8O95169 186 aa2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 IL6STP40189 918 aaPredicted RBP2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 P2RX3P56373 397 aa2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 MGAT2Q10469 447 aa2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 MUM1Q2TAK8 710 aa2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 ODF3L2Q3SX64 289 aa2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 RNASE12Q5GAN4 147 aaKnown RBP2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 RSPH3Q86UC2 560 aa2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 RASSF3Q86WH2 238 aa2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 ZNF485Q8NCK3 441 aa2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 THAP7Q9BT49 309 aaPredicted RBP2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 TOPORSQ9NS56 1045 aaPredicted RBP2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 ASIC5Q9NY37 505 aa2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 SNTG2Q9NY99 539 aa2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 RAD54BQ9Y620 910 aa2.31□□□□□ -2.04
MIR548I3-201ENST00000408378 WDR81Q562E7 1941 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 TMEM272A0A1B0GTI8 110 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 A1L4Q6 167 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 ZNF785A8K8V0 405 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 SOAT2O75908 522 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 HOXB2P14652 356 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 ADCYAP1R1P41586 468 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 LSSP48449 732 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 YPEL5P62699 121 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 MALLQ13021 153 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 C2orf27AQ580R0 203 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 DALRD3Q5D0E6 543 aaKnown RBP2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 RHBDF2Q6PJF5 856 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 TMEM108Q6UXF1 575 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 RTL10Q7L3V2 364 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 BCDIN3DQ7Z5W3 292 aaKnown RBP2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 MYPOPQ86VE0 399 aaPredicted RBP2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 IL17RDQ8NFM7 739 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 IGFBPL1Q8WX77 278 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 DPF2Q92785 391 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 ANKRD9Q96BM1 317 aaPredicted RBP2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 GMLQ99445 158 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 SCNM1Q9BWG6 230 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 RBM38Q9H0Z9 239 aaKnown RBP2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 PCDHGA2Q9Y5H1 932 aa2.3□□□□□ -2.04
MIR548I3-201ENST00000408378 COL2A1P02458 1487 aaPredicted RBP2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 TTBK1Q5TCY1 1321 aaPredicted RBP2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 FAM171A2A8MVW0 826 aa2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 FKBP9O95302 570 aa2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 GM2AP17900 193 aa2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 GCLCP48506 637 aaPredicted RBP2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 VEGFCP49767 419 aa2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 MRPS9P82933 396 aaKnown RBP2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 STIM1Q13586 685 aa2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 RBM39Q14498 530 aaKnown RBP2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 ZNF718Q3SXZ3 478 aa2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 ICE2Q659A1 982 aa2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 ADAM5Q6NVV9 412 aa2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 PRSS57Q6UWY2 283 aa2.29□□□□□ -2.04
MIR548I3-201ENST00000408378 FKBP9P1Q75LS8 142 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms