RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 H3BRJ5 948 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 LAMC2Q13753 1193 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 SGSM1Q2NKQ1 1148 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 DCAF12L1Q5VU92 463 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 TTC8Q8TAM2 541 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 STK32AQ8WU08 396 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 SEMA4DQ92854 862 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 RBM41Q96IZ5 413 aaKnown RBP16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 NIF3L1Q9GZT8 377 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 DHX35Q9H5Z1 703 aaKnown RBP16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 IFT122Q9HBG6 1241 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 PCDHA3Q9Y5H8 950 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 IQANK1A0A1B0GTG1 560 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 XPOTO43592 962 aaKnown RBP16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 GRIN3BO60391 1043 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 PFDN1O60925 122 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 SNX16P57768 344 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 COG7P83436 770 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 EEF1DP3Q658K8 133 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 ACAD10Q6JQN1 1059 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 ZDHHC24Q6UX98 284 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 ACOT1Q86TX2 421 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 FAM228AQ86W67 206 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 MAP7D3Q8IWC1 876 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 DNERQ8NFT8 737 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 BEST2Q8NFU1 509 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 HASPINQ8TF76 798 aa16.43■□□□□ 0.22
CCDC85A-201ENST00000407595 SPECC1L-ADORA2AF8WAN1 911 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 CXCL11O14625 94 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 STAG3L1P0CL83 205 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 PDGFRAP16234 1089 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 NCF2P19878 526 aaPredicted RBP16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 VHLP40337 213 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 PAPOLAP51003 745 aaKnown RBP16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 MTFR1Q15390 333 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 MAGEC3Q8TD91 643 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 DCLRE1BQ9H816 532 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 CISHQ9NSE2 258 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 PSMC3IPQ9P2W1 217 aaPredicted RBP16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 CHMP2BQ9UQN3 213 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 ATRNL1Q5VV63 1379 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 SLC26A4O43511 780 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 ALDH18A1P54886 795 aaKnown RBP16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 ITKQ08881 620 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 DGKDQ16760 1214 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 SNX30Q5VWJ9 437 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 SYDE1Q6ZW31 735 aaPredicted RBP16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 ENOSF1Q7L5Y1 443 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 SLFN11Q7Z7L1 901 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 MAP4K3Q8IVH8 894 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 ATP11CQ8NB49 1132 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 C17orf75Q9HAS0 396 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 ZDHHC18Q9NUE0 388 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 NDE1Q9NXR1 346 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 MAP3K20Q9NYL2 800 aaKnown RBP16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 GRHL1Q9NZI5 618 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 TIMM13Q9Y5L4 95 aaPredicted RBP16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 LTBP4Q8N2S1 1624 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 PLCH1Q4KWH8 1693 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 BTAF1O14981 1849 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 TRPA1O75762 1119 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 GZMAP12544 262 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 RGS9BPQ6ZS82 235 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 REPS2Q8NFH8 660 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 PIP4K2CQ8TBX8 421 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 MIPOL1Q8TD10 442 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 SLC26A7Q8TE54 656 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 DNAJB3Q8WWF6 145 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 ART4Q93070 314 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 SIK2Q9H0K1 926 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 SENP1Q9P0U3 644 aa16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 SIPA1L3O60292 1781 aaPredicted RBP16.42■□□□□ 0.22
CCDC85A-201ENST00000407595 ABCD1P33897 745 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 TJP1Q07157 1748 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 BNIP1Q12981 228 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 ZNF268Q14587 947 aaPredicted RBP16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 FAM182AQ5T1J6 154 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 PLEKHH3Q7Z736 793 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 ECHDC2Q86YB7 292 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 TEPSINQ96N21 525 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 SHCBP1LQ9BZQ2 653 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 MROH8Q9H579 483 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 SNCAIPQ9Y6H5 919 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 ADCY3O60266 1144 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 CALB1P05937 261 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 ZNF280AP59817 542 aaPredicted RBP16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 CAPSQ13938 189 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 SPDYCQ5MJ68 293 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 LBX2Q6XYB7 198 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 EPS8L1Q8TE68 723 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 FAM111AQ96PZ2 611 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 MANSC1Q9H8J5 431 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 PARVAQ9NVD7 372 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 CCDC78A2IDD5 438 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 LGR5O75473 907 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 SLC4A1P02730 911 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 GARTP22102 1010 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 SDC4P31431 198 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 PTDSS1P48651 473 aaKnown RBP16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 GTF2A2P52657 109 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms