RNA–Protein interactions for RNA: ENST00000406246.7

RELA-202, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RELA, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-202ENST00000406246 STRIP2Q9ULQ0 834 aa20.01■□□□□ 0.79
RELA-202ENST00000406246 ATP11AP98196 1134 aa20■□□□□ 0.79
RELA-202ENST00000406246 CTU1Q7Z7A3 348 aaKnown RBP20■□□□□ 0.79
RELA-202ENST00000406246 ECHDC2Q86YB7 292 aa20■□□□□ 0.79
RELA-202ENST00000406246 HACE1Q8IYU2 909 aa20■□□□□ 0.79
RELA-202ENST00000406246 DDX43Q9NXZ2 648 aaKnown RBP20■□□□□ 0.79
RELA-202ENST00000406246 GIT1Q9Y2X7 761 aa20■□□□□ 0.79
RELA-202ENST00000406246 SMC1AQ14683 1233 aaKnown RBP20■□□□□ 0.79
RELA-202ENST00000406246 MDH1BQ5I0G3 518 aa20■□□□□ 0.79
RELA-202ENST00000406246 ZNF280BQ86YH2 543 aa20■□□□□ 0.79
RELA-202ENST00000406246 B3GALNT2Q8NCR0 500 aa20■□□□□ 0.79
RELA-202ENST00000406246 SLC35F5Q8WV83 523 aa20■□□□□ 0.79
RELA-202ENST00000406246 HAUS1Q96CS2 278 aa20■□□□□ 0.79
RELA-202ENST00000406246 CFAP57Q96MR6 1250 aa20■□□□□ 0.79
RELA-202ENST00000406246 GDF3Q9NR23 364 aa20■□□□□ 0.79
RELA-202ENST00000406246 CCDC188H7C350 402 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 LRCH4O75427 683 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 TFE3P19532 575 aaPredicted RBP19.99■□□□□ 0.79
RELA-202ENST00000406246 HLTFQ14527 1009 aaKnown RBP eCLIP19.99■□□□□ 0.79
RELA-202ENST00000406246 UPP1Q16831 310 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 FAM26DQ5JW98 314 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 MFSD7Q6UXD7 560 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 IPO4Q8TEX9 1081 aaKnown RBP19.99■□□□□ 0.79
RELA-202ENST00000406246 MCRS1Q96EZ8 462 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 SCLYQ96I15 445 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 TSEN34Q9BSV6 310 aaKnown RBP19.99■□□□□ 0.79
RELA-202ENST00000406246 HCSTQ9UBK5 93 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 PAPSS1O43252 624 aaPredicted RBP19.99■□□□□ 0.79
RELA-202ENST00000406246 KRT1P04264 644 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 GATMP50440 423 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 DR1Q01658 176 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 UNC93AQ86WB7 457 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 SLC43A3Q8NBI5 491 aa19.99■□□□□ 0.79
RELA-202ENST00000406246 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.99■□□□□ 0.79
RELA-202ENST00000406246 NBNO60934 754 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 ZNF623O75123 536 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 CD48P09326 243 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 GABRB2P47870 512 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 FAM193AP78312 1265 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 ZNF268Q14587 947 aaPredicted RBP19.98■□□□□ 0.79
RELA-202ENST00000406246 GPNMBQ14956 572 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 TCTN1Q2MV58 587 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 GLE1Q53GS7 698 aaKnown RBP19.98■□□□□ 0.79
RELA-202ENST00000406246 CCDC137Q6PK04 289 aaKnown RBP19.98■□□□□ 0.79
RELA-202ENST00000406246 PRUNE1Q86TP1 453 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 FUKQ8N0W3 1084 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 AENQ8WTP8 325 aaKnown RBP19.98■□□□□ 0.79
RELA-202ENST00000406246 RXFP2Q8WXD0 754 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 SLC38A7Q9NVC3 462 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 KIAA1257Q9ULG3 409 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 GOLGA6L10A0A0M3HER8 536 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 MYBPHLA2RUH7 354 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 PPP1R2P3Q6NXS1 205 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 PAQR9Q6ZVX9 377 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 IFT20Q8IY31 132 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 CRYBG2Q8N1P7 616 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 CRTAC1Q9NQ79 661 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 TMEM30AQ9NV96 361 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 PHF24Q9UPV7 400 aa19.98■□□□□ 0.79
RELA-202ENST00000406246 LRRD1A4D1F6 860 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 PTPN1P18031 435 aaKnown RBP19.97■□□□□ 0.79
RELA-202ENST00000406246 CACNA2D1P54289 1103 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 TRIP13Q15645 432 aaPredicted RBP19.97■□□□□ 0.79
RELA-202ENST00000406246 LIMS2Q7Z4I7 341 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 TTC39CQ8N584 583 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 DBF4BQ8NFT6 615 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 NAP1L3Q99457 506 aaPredicted RBP19.97■□□□□ 0.79
RELA-202ENST00000406246 BEGAINQ9BUH8 593 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 SAE1Q9UBE0 346 aaPredicted RBP19.97■□□□□ 0.79
RELA-202ENST00000406246 TTC3P53804 2025 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 PSTPIP1O43586 416 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 PHF2O75151 1096 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 PDGFRAP16234 1089 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 NDUFV1P49821 464 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 ATXN1P54253 815 aaKnown RBP19.97■□□□□ 0.79
RELA-202ENST00000406246 CCL23P55773 120 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 DYNLT1P63172 113 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 CLLU1OSQ5K130 101 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 LRRC8DQ7L1W4 858 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 ZNF598Q86UK7 904 aaKnown RBP19.97■□□□□ 0.79
RELA-202ENST00000406246 CCDC105Q8IYK2 499 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 TSEN2Q8NCE0 465 aaKnown RBP19.97■□□□□ 0.79
RELA-202ENST00000406246 TMEM209Q96SK2 561 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 MED10Q9BTT4 135 aa19.97■□□□□ 0.79
RELA-202ENST00000406246 DDHD2O94830 711 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 CCL5P13501 91 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 BCAR1P56945 870 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 PIGHQ14442 188 aaPredicted RBP19.96■□□□□ 0.79
RELA-202ENST00000406246 ARHGEF6Q15052 776 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 OLFML1Q6UWY5 402 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 CD300LGQ6UXG3 332 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 HDXQ7Z353 690 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 TOP6BLQ8N6T0 577 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 HSPH1Q92598 858 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 KHSRPQ92945 711 aaKnown RBP eCLIP19.96■□□□□ 0.79
RELA-202ENST00000406246 PEBP4Q96S96 227 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 KCNK16Q96T55 309 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 ADAM33Q9BZ11 813 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 MAGEB5Q9BZ81 275 aa19.96■□□□□ 0.79
RELA-202ENST00000406246 OSBPL8Q9BZF1 889 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms