RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 QSER1Q2KHR3 1735 aa8.07□□□□□ -1.12
HDAC9-201ENST00000401921 A0A1W2PPM1 405 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 SOWAHBA6NEL2 793 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 ADM5C9JUS6 153 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 MAFO75444 373 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-201ENST00000401921 CD48P09326 243 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 TROVE2P10155 538 aaKnown RBP eCLIP8.06□□□□□ -1.12
HDAC9-201ENST00000401921 SLC8A1P32418 973 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 KCNJ2P63252 427 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 TAP1Q03518 808 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 PLCB4Q15147 1175 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 PTPN20Q4JDL3 420 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 PPM1NQ8N819 430 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 ATP11CQ8NB49 1132 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 TTC13Q8NBP0 860 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 FBXO36Q8NEA4 188 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 TMEM109Q9BVC6 243 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 C12orf65Q9H3J6 166 aaKnown RBP8.06□□□□□ -1.12
HDAC9-201ENST00000401921 TMEM134Q9H6X4 195 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 SMYD3Q9H7B4 428 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 NOD2Q9HC29 1040 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 NPHS2Q9NP85 383 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 RAB6BQ9NRW1 208 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.06□□□□□ -1.12
HDAC9-201ENST00000401921 ASNSD1Q9NWL6 643 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 HESX1Q9UBX0 185 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 PHTF1Q9UMS5 762 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.06□□□□□ -1.12
HDAC9-201ENST00000401921 hCG_1818297A0A087WSY0 165 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 BHMG1C9JSJ3 638 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-201ENST00000401921 NFICP08651 508 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 STAG3L1P0CL83 205 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 RPA3P35244 121 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-201ENST00000401921 IREB2P48200 963 aaKnown RBP8.06□□□□□ -1.12
HDAC9-201ENST00000401921 MMRN1Q13201 1228 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 TAF5Q15542 800 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 NPNTQ6UXI9 565 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 MAP7D3Q8IWC1 876 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 GBP7Q8N8V2 638 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-201ENST00000401921 REPS2Q8NFH8 660 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 OR6B3Q8NGW1 331 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 PDGFCQ9NRA1 345 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 PSMC3IPQ9P2W1 217 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-201ENST00000401921 SNX9Q9Y5X1 595 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 RPS6KL1Q9Y6S9 549 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 CNTNAP2Q9UHC6 1331 aa8.06□□□□□ -1.12
HDAC9-201ENST00000401921 EIF4E1BA6NMX2 242 aaKnown RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 LACTBL1A8MY62 500 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 H0Y3Z8 333 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 KCNN4O15554 427 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 ARIH2O95376 493 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 ZBED1O96006 694 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 TARSP26639 723 aaKnown RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 MIPP30301 263 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 PHKA2P46019 1235 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 COPS2P61201 443 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 ELF3P78545 371 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 ROR1Q01973 937 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 GAD2Q05329 585 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 PTPN11Q06124 597 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 MCL1Q07820 350 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 TTLL4Q14679 1199 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 MORF4L2Q15014 288 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 PDCD2Q16342 344 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 AMHR2Q16671 573 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 ANKRD20A3Q5VUR7 823 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 LBX2Q6XYB7 198 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 PIGWQ7Z7B1 504 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 PCGF5Q86SE9 256 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 ALLCQ8N6M5 410 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 KCNV2Q8TDN2 545 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 FAM149B1Q96BN6 582 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 KIF12Q96FN5 646 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 HPDLQ96IR7 371 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 CLMNQ96JQ2 1002 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 MAGEB18Q96M61 343 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 CPXM1Q96SM3 734 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 PCYT2Q99447 389 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 SMARCAD1Q9H4L7 1026 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 SUDS3Q9H7L9 328 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 CLEC11AQ9Y240 323 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 MSCO60682 206 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 LSM8O95777 96 aaKnown RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 APRTP07741 180 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 GHRP10912 638 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 EIF4BP23588 611 aaKnown RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 RPS6KA3P51812 740 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 BCAR1P56945 870 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 GHRHRQ02643 423 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 NR1H3Q13133 447 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 EFTUD2Q15029 972 aaKnown RBP eCLIP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 C15orf59Q2T9L4 293 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 GLRA4Q5JXX5 417 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 JADE1Q6IE81 842 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 RHBDF2Q6PJF5 856 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 PPIL6Q8IXY8 311 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 KLHL23Q8NBE8 558 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 PRCCQ92733 491 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 NIFKQ9BYG3 293 aaKnown RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 SLC13A1Q9BZW2 595 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms