RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 KLF6Q99612 283 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 NUDT12Q9BQG2 462 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 TRIM62Q9BVG3 475 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 CISHQ9NSE2 258 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 DDIT4Q9NX09 232 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 GBF1Q92538 1859 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 WNK3Q9BYP7 1800 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 NRXN3Q9Y4C0 1643 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 F8W8V4 182 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SERPIND1P05546 499 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 POLBP06746 335 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 CYP2C9P11712 490 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 EPHB2P29323 1055 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 COILP38432 576 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 CASP5P51878 434 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 LRRC74AQ0VAA2 488 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 LAMTOR4Q0VGL1 99 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SV2CQ496J9 727 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 GLB1LQ6UWU2 654 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 MFN1Q8IWA4 741 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 TTC39CQ8N584 583 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 LRRN4CLQ8ND94 238 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SHCBP1Q8NEM2 672 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 RFWD2Q8NHY2 731 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 CERKQ8TCT0 537 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 ELMO2Q96JJ3 720 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 TSC22D3Q99576 134 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 TRIM15Q9C019 465 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 KCTD10Q9H3F6 313 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 DDX4Q9NQI0 724 aaKnown RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 PRMT7Q9NVM4 692 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 UBP1Q9NZI7 540 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 THEGQ9P2T0 379 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 PSMC3IPQ9P2W1 217 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 TOPAZ1Q8N9V7 1692 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SBF1O95248 1867 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 HMGB3O15347 200 aaKnown RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 ZSCAN9O15535 394 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 MEFVO15553 781 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 SEC24DO94855 1032 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 TGM2P21980 687 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 RRM1P23921 792 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 NFKBIAP25963 317 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 CASP7P55210 303 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 PLIN5Q00G26 463 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 COL9A3Q14050 684 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 USP10Q14694 798 aaKnown RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 ZNF571Q7Z3V5 609 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 ST13P4Q8IZP2 240 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 PPHLN1Q8NEY8 458 aaKnown RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 CEP70Q8NHQ1 597 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 EPS8L3Q8TE67 593 aaKnown RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 SLC20A1Q8WUM9 679 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 PURBQ96QR8 312 aaKnown RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 GPR63Q9BZJ6 419 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SHCBP1LQ9BZQ2 653 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SPATC1LQ9H0A9 340 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 C17orf75Q9HAS0 396 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 PLEKHA5Q9HAU0 1116 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 DYRK4Q9NR20 520 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 PIH1D1Q9NWS0 290 aaKnown RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.39□□□□□ -1.87
KNL1-202ENST00000399668 SENP1Q9P0U3 644 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 ARHGAP20Q9P2F6 1191 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 WDR35Q9P2L0 1181 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 TMX2Q9Y320 296 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 HELZP42694 1942 aaKnown RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 CFAP73A6NFT4 308 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SLC26A4O43511 780 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 CCDC22O60826 627 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 DGKIO75912 1065 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 MYL2P10916 166 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 GPD1P21695 349 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 AKAP5P24588 427 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 MAP4P27816 1152 aaKnown RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 WEE1P30291 646 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 HMOX2P30519 316 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 DAB2P98082 770 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 ST3GAL1Q11201 340 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 STX3Q13277 289 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SHROOM1Q2M3G4 852 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 ITPRIPL1Q6GPH6 555 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SPATA21Q7Z572 469 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 IFNEQ86WN2 208 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 PBXIP1Q96AQ6 731 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 ZBTB18Q99592 522 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 OSMRQ99650 979 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 TRIM54Q9BYV2 358 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SLC24A3Q9HC58 644 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 LCMT1Q9UIC8 334 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 ARL2BPQ9Y2Y0 163 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 V9GYQ6 96 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 PCNX2A6NKB5 2137 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 C2orf16Q68DN1 1984 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 PLXNB1O43157 2135 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 A0A0U1RQJ8 604 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 EML1O00423 815 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 PRPF4O43172 522 aaKnown RBP eCLIP3.39□□□□□ -1.87
KNL1-202ENST00000399668 AP1G2O75843 785 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 ENDOD1O94919 500 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms