RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 ITPKAP23677 461 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 LIG4P49917 911 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 ATXN3P54252 364 aaPredicted RBP19.44■□□□□ 0.7
UFD1-202ENST00000399523 GUCY1B3Q02153 619 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 RAD51AP2Q09MP3 1159 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 TMEM132DQ14C87 1099 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 DUOXA1Q1HG43 343 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 SDHAF4Q5VUM1 108 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 CEP76Q8TAP6 659 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 SH3RF2Q8TEC5 729 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 FAM212AQ96EL1 285 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 PI4K2AQ9BTU6 479 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 MMTAG2Q9BU76 263 aaKnown RBP19.44■□□□□ 0.7
UFD1-202ENST00000399523 CAPN10Q9HC96 672 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 TRPC7Q9HCX4 862 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 CPSF3Q9UKF6 684 aaKnown RBP19.44■□□□□ 0.7
UFD1-202ENST00000399523 PLXNB3Q9ULL4 1909 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 A0A0B4J269 797 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 PP2D1A8MPX8 630 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 OPHN1O60890 802 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 NFATC1O95644 943 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 PIGRP01833 764 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 CFIP05156 583 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 SERPINF2P08697 491 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 CD59P13987 128 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 TAF6P49848 677 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 NCKAP1LP55160 1127 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 RPL10AP62906 217 aaKnown RBP19.43■□□□□ 0.7
UFD1-202ENST00000399523 GFPT1Q06210 699 aaPredicted RBP19.43■□□□□ 0.7
UFD1-202ENST00000399523 BYSLQ13895 437 aaKnown RBP19.43■□□□□ 0.7
UFD1-202ENST00000399523 NFE2Q16621 373 aaPredicted RBP19.43■□□□□ 0.7
UFD1-202ENST00000399523 HSF5Q4G112 596 aaPredicted RBP19.43■□□□□ 0.7
UFD1-202ENST00000399523 ALLCQ8N6M5 410 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 IL17RCQ8NAC3 791 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 TTC16Q8NEE8 873 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 LEO1Q8WVC0 666 aaPredicted RBP19.43■□□□□ 0.7
UFD1-202ENST00000399523 ABCB6Q9NP58 842 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 FSCN3Q9NQT6 498 aa19.43■□□□□ 0.7
UFD1-202ENST00000399523 SGK1O00141 431 aa19.42■□□□□ 0.7
UFD1-202ENST00000399523 HNRNPDLO14979 420 aaKnown RBP19.42■□□□□ 0.7
UFD1-202ENST00000399523 SEC24BO95487 1268 aa19.42■□□□□ 0.7
UFD1-202ENST00000399523 NBR1Q14596 966 aa19.42■□□□□ 0.7
UFD1-202ENST00000399523 DDR2Q16832 855 aa19.42■□□□□ 0.7
UFD1-202ENST00000399523 ZC2HC1CQ53FD0 456 aaPredicted RBP19.42■□□□□ 0.7
UFD1-202ENST00000399523 ARL14EPQ8N8R7 260 aaPredicted RBP19.42■□□□□ 0.7
UFD1-202ENST00000399523 SYT2Q8N9I0 419 aaPredicted RBP19.42■□□□□ 0.7
UFD1-202ENST00000399523 TXNDC5Q8NBS9 432 aaKnown RBP19.42■□□□□ 0.7
UFD1-202ENST00000399523 LRRC15Q8TF66 581 aa19.42■□□□□ 0.7
UFD1-202ENST00000399523 ADAMTS14Q8WXS8 1223 aa19.42■□□□□ 0.7
UFD1-202ENST00000399523 BBC3Q96PG8 261 aaPredicted RBP19.42■□□□□ 0.7
UFD1-202ENST00000399523 GTPBP2Q9BX10 602 aaKnown RBP19.42■□□□□ 0.7
UFD1-202ENST00000399523 ASB7Q9H672 318 aa19.42■□□□□ 0.7
UFD1-202ENST00000399523 POLMQ9NP87 494 aaPredicted RBP19.42■□□□□ 0.7
UFD1-202ENST00000399523 CIZ1Q9ULV3 898 aaPredicted RBP19.42■□□□□ 0.7
UFD1-202ENST00000399523 ARHGAP26Q9UNA1 814 aa19.42■□□□□ 0.7
UFD1-202ENST00000399523 C2CD2Q9Y426 696 aa19.42■□□□□ 0.7
UFD1-202ENST00000399523 HELZP42694 1942 aaKnown RBP19.42■□□□□ 0.7
UFD1-202ENST00000399523 ATXN2Q99700 1313 aaKnown RBP19.42■□□□□ 0.7
UFD1-202ENST00000399523 MYOFQ9NZM1 2061 aa19.41■□□□□ 0.7
UFD1-202ENST00000399523 A0A0A0MRY4 1105 aa19.41■□□□□ 0.7
UFD1-202ENST00000399523 KLF8O95600 359 aaPredicted RBP19.41■□□□□ 0.7
UFD1-202ENST00000399523 TSPY1Q01534 308 aa19.41■□□□□ 0.7
UFD1-202ENST00000399523 CCNI2Q6ZMN8 369 aaPredicted RBP19.41■□□□□ 0.7
UFD1-202ENST00000399523 MINDY1Q8N5J2 469 aa19.41■□□□□ 0.7
UFD1-202ENST00000399523 MSTO1Q9BUK6 570 aa19.41■□□□□ 0.7
UFD1-202ENST00000399523 CCDC86Q9H6F5 360 aaKnown RBP19.41■□□□□ 0.7
UFD1-202ENST00000399523 DNAAF2Q9NVR5 837 aaKnown RBP19.41■□□□□ 0.7
UFD1-202ENST00000399523 KCND2Q9NZV8 630 aa19.41■□□□□ 0.7
UFD1-202ENST00000399523 LARSQ9P2J5 1176 aaKnown RBP19.41■□□□□ 0.7
UFD1-202ENST00000399523 C2orf78A6NCI8 922 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 KPNA7A9QM74 516 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 HDCP19113 662 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 SCP2P22307 547 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 CYP2F1P24903 491 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 TRIP6Q15654 476 aaKnown RBP19.4■□□□□ 0.7
UFD1-202ENST00000399523 IL17AQ16552 155 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 EOGTQ5NDL2 527 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 RABEPKQ7Z6M1 372 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 SFTPA1Q8IWL2 248 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 KCTD17Q8N5Z5 321 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 KIAA1958Q8N8K9 716 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 DPP3Q9NY33 737 aa19.4■□□□□ 0.7
UFD1-202ENST00000399523 BCCIPQ9P287 314 aaKnown RBP eCLIP19.4■□□□□ 0.7
UFD1-202ENST00000399523 MAST4O15021 2626 aa19.39■□□□□ 0.7
UFD1-202ENST00000399523 GOLGA4Q13439 2230 aaKnown RBP19.39■□□□□ 0.69
UFD1-202ENST00000399523 MYMKA6NI61 221 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 ARHGAP33O14559 1287 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 AP5Z1O43299 807 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 ADAM23O75077 832 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 ZIC2O95409 532 aaPredicted RBP19.39■□□□□ 0.69
UFD1-202ENST00000399523 KIR2DL1P43626 348 aaPredicted RBP19.39■□□□□ 0.69
UFD1-202ENST00000399523 SLC12A3P55017 1021 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 ANAPC15P60006 121 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 ZXDBP98169 803 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 MESP2Q0VG99 397 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 ST3GAL1Q11201 340 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 SLC14A1Q13336 389 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 KCNB1Q14721 858 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 HYIQ5T013 277 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 SLC39A4Q6P5W5 647 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms