RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SCN4BQ8IWT1 228 aa15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 CELF5Q8N6W0 485 aaKnown RBP15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 STKLD1Q8NE28 680 aa15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 SPATA20Q8TB22 786 aa15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 TAF4BQ92750 862 aa15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 CLDN23Q96B33 292 aa15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 LRRC3BQ96PB8 259 aa15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 BCO2Q9BYV7 579 aa15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 GTPBP4Q9BZE4 634 aaKnown RBP15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 KIF9Q9HAQ2 790 aa15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 MAGED2Q9UNF1 606 aaPredicted RBP15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 CACNA1IQ9P0X4 2223 aa15.87■□□□□ 0.13
SMIM11A-203ENST00000399299 A8MXQ7 604 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 TRIM66O15016 1216 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 LRRN2O75325 713 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 SMC2O95347 1197 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 ASS1P00966 412 aaKnown RBP15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 P4HA1P13674 534 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 PTPN1P18031 435 aaKnown RBP15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 CD72P21854 359 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 TARSP26639 723 aaKnown RBP15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 PSMC2P35998 433 aaKnown RBP15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 AVPR1AP37288 418 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 RPS9P46781 194 aaKnown RBP15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 VAMP7P51809 220 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 PLCB2Q00722 1185 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 CYP27A1Q02318 531 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 ZNF268Q14587 947 aaPredicted RBP15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 MDH1BQ5I0G3 518 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 MON1AQ86VX9 555 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 C1orf210Q8IVY1 113 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 ELOA2Q8IYF1 753 aaPredicted RBP15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 FAM186BQ8IYM0 893 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 MAB21L3Q8N8X9 362 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 B3GALNT2Q8NCR0 500 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 BPIFB1Q8TDL5 484 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 CSGALNACT1Q8TDX6 532 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 C8orf48Q96LL4 319 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 ELOVL4Q9GZR5 314 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 SMYD3Q9H7B4 428 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 C8orf33Q9H7E9 229 aaPredicted RBP15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 EHD2Q9NZN4 543 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 HOOK1Q9UJC3 728 aaKnown RBP15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 CIZ1Q9ULV3 898 aaPredicted RBP15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 MTF2Q9Y483 593 aaPredicted RBP15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 PIAS3Q9Y6X2 628 aa15.86■□□□□ 0.13
SMIM11A-203ENST00000399299 FANCMQ8IYD8 2048 aa15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 KRT13P13646 458 aa15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 ANXA13P27216 316 aa15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 GRIK1P39086 918 aa15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 NOP14P78316 857 aaKnown RBP15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 ADAM9Q13443 819 aa15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 ZNF658Q5TYW1 1059 aaPredicted RBP15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 TXNDC8Q6A555 127 aa15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 DENND5BQ6ZUT9 1274 aa15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 ZNF687Q8N1G0 1237 aa15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 TNIP3Q96KP6 325 aa15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 TTLL2Q9BWV7 592 aa15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 DPEP3Q9H4B8 488 aa15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 HELZP42694 1942 aaKnown RBP15.85■□□□□ 0.13
SMIM11A-203ENST00000399299 DMDP11532 3685 aa15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 CLSTN1O94985 981 aa15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 HLA-DRAP01903 254 aa15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 PIK3CAP42336 1068 aa15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 CDH8P55286 799 aa15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 FZD5Q13467 585 aa15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 SCARA5Q6ZMJ2 495 aa15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 SMYD4Q8IYR2 804 aaPredicted RBP15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 USP13Q92995 863 aaPredicted RBP15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 SMARCE1Q969G3 411 aa15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 IMPG2Q9BZV3 1241 aa15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 TDP1Q9NUW8 608 aa15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 THG1LQ9NWX6 298 aaKnown RBP15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 PCDHA5Q9Y5H7 936 aa15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 RIF1Q5UIP0 2472 aaKnown RBP15.84■□□□□ 0.13
SMIM11A-203ENST00000399299 ZNF292O60281 2723 aa15.83■□□□□ 0.13
SMIM11A-203ENST00000399299 F8VP50 259 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 TRIM49P0CI25 452 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 TRIM49CP0CI26 452 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 PFKLP17858 780 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 GTF2H1P32780 548 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 PRCPP42785 496 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 RAP1GAPP47736 663 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 PDE6CP51160 858 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 UNC93AQ86WB7 457 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 RALGPS2Q86X27 583 aaPredicted RBP15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 GPIHBP1Q8IV16 184 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 ZC3H3Q8IXZ2 948 aaKnown RBP15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 FAM3CQ92520 227 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 IER2Q9BTL4 223 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 B3GNT5Q9BYG0 378 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 ZNF518BQ9C0D4 1074 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 SMG9Q9H0W8 520 aaKnown RBP15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 SDCBP2Q9H190 292 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 TMEM8AQ9HCN3 771 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 CCL26Q9Y258 94 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 ATP8B3O60423 1300 aa15.83■□□□□ 0.12
SMIM11A-203ENST00000399299 TRAV19A0A0A6YYK7 116 aa15.82■□□□□ 0.12
SMIM11A-203ENST00000399299 CETN3O15182 167 aa15.82■□□□□ 0.12
SMIM11A-203ENST00000399299 USP17L7P0C7H9 530 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms