RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 LRRTM3Q86VH5 581 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 IPO4Q8TEX9 1081 aaKnown RBP17.61■□□□□ 0.41
CDH23-204ENST00000398792 STK32AQ8WU08 396 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 ALS2CR12Q96Q35 445 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 NUP85Q9BW27 656 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 DUSP16Q9BY84 665 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 AAASQ9NRG9 546 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 TMLHEQ9NVH6 421 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 SPG21Q9NZD8 308 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 UVRAGQ9P2Y5 699 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 CHORDC1Q9UHD1 332 aaPredicted RBP17.61■□□□□ 0.41
CDH23-204ENST00000398792 OR6C75A6NL08 312 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 TLL1O43897 1013 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 SOD2P04179 222 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 OR4Q2P0C623 313 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 PTPRDP23468 1912 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 PLA2G4AP47712 749 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 GABRB2P47870 512 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 USP41Q3LFD5 358 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 C9orf50Q5SZB4 431 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 CYP4A22Q5TCH4 519 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 PLEKHA7Q6IQ23 1121 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 PMF1Q6P1K2 205 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 CLEC20AQ6ZU45 233 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 ANKS3Q6ZW76 656 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 TPCN2Q8NHX9 752 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 ZNF564Q8TBZ8 553 aaPredicted RBP17.61■□□□□ 0.41
CDH23-204ENST00000398792 CLP1Q92989 425 aaKnown RBP17.61■□□□□ 0.41
CDH23-204ENST00000398792 C18orf8Q96DM3 657 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 SMARCD1Q96GM5 515 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 HERC2P3Q9BVR0 1158 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 SYNCQ9H7C4 482 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 ST7Q9NRC1 585 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 DNAI1Q9UI46 699 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 SCINQ9Y6U3 715 aa17.61■□□□□ 0.41
CDH23-204ENST00000398792 TCRBV5S1A1TA0A578 114 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 GRID2IPA4D2P6 1211 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 E5RJQ4 531 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 H7C4K7 107 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 XPO1O14980 1071 aaKnown RBP17.6■□□□□ 0.41
CDH23-204ENST00000398792 TBC1D4O60343 1298 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 RGS7P49802 495 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 CDR1P51861 262 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 SLC8A3P57103 927 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 PHLDB2Q86SQ0 1253 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 XYLT1Q86Y38 959 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 DCP1BQ8IZD4 617 aaKnown RBP17.6■□□□□ 0.41
CDH23-204ENST00000398792 PIK3R5Q8WYR1 880 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 CALR3Q96L12 384 aaKnown RBP17.6■□□□□ 0.41
CDH23-204ENST00000398792 SLC4A5Q9BY07 1137 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 OXCT2Q9BYC2 517 aaPredicted RBP17.6■□□□□ 0.41
CDH23-204ENST00000398792 CYLDQ9NQC7 956 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 CHST7Q9NS84 486 aa17.6■□□□□ 0.41
CDH23-204ENST00000398792 LCHNA4D1U4 455 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 PALMO75781 387 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 AP1G2O75843 785 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 BEST1O76090 585 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 RPL34P49207 117 aaKnown RBP17.59■□□□□ 0.41
CDH23-204ENST00000398792 MAMLD1Q13495 774 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 SLC39A12Q504Y0 691 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 DNTTIP2Q5QJE6 756 aaKnown RBP17.59■□□□□ 0.41
CDH23-204ENST00000398792 DNAJC24Q6P3W2 148 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 PRSS55Q6UWB4 352 aaPredicted RBP17.59■□□□□ 0.41
CDH23-204ENST00000398792 C4orf50Q6ZRC1 276 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 LRRC57Q8N9N7 239 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 C3orf20Q8ND61 904 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 RHOBTB2Q9BYZ6 727 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 MIS12Q9H081 205 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 PARVAQ9NVD7 372 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 WDR35Q9P2L0 1181 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 MTRRQ9UBK8 725 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 PCDHB12Q9Y5F1 795 aa17.59■□□□□ 0.41
CDH23-204ENST00000398792 PATJQ8NI35 1801 aa17.58■□□□□ 0.41
CDH23-204ENST00000398792 CACNA2D1P54289 1103 aa17.58■□□□□ 0.41
CDH23-204ENST00000398792 PSMD5Q16401 504 aa17.58■□□□□ 0.41
CDH23-204ENST00000398792 RSPO2Q6UXX9 243 aaPredicted RBP17.58■□□□□ 0.41
CDH23-204ENST00000398792 TMEM110Q86TL2 294 aa17.58■□□□□ 0.41
CDH23-204ENST00000398792 DDX53Q86TM3 631 aaKnown RBP17.58■□□□□ 0.41
CDH23-204ENST00000398792 PIGZQ86VD9 579 aa17.58■□□□□ 0.41
CDH23-204ENST00000398792 SPATA2LQ8IUW3 424 aaPredicted RBP17.58■□□□□ 0.41
CDH23-204ENST00000398792 ZMIZ2Q8NF64 920 aa17.58■□□□□ 0.41
CDH23-204ENST00000398792 RIN2Q8WYP3 895 aaPredicted RBP17.58■□□□□ 0.41
CDH23-204ENST00000398792 HSFY1Q96LI6 401 aa17.58■□□□□ 0.41
CDH23-204ENST00000398792 RNPC3Q96LT9 517 aaKnown RBP17.58■□□□□ 0.41
CDH23-204ENST00000398792 SMOQ99835 787 aa17.58■□□□□ 0.41
CDH23-204ENST00000398792 CSNK1G1Q9HCP0 422 aa17.58■□□□□ 0.41
CDH23-204ENST00000398792 MRPL47Q9HD33 250 aaKnown RBP17.58■□□□□ 0.41
CDH23-204ENST00000398792 TMEM30AQ9NV96 361 aa17.58■□□□□ 0.41
CDH23-204ENST00000398792 BUB1BO60566 1050 aaPredicted RBP17.58■□□□□ 0.4
CDH23-204ENST00000398792 CPB1P15086 417 aa17.58■□□□□ 0.4
CDH23-204ENST00000398792 BDNFP23560 247 aa17.58■□□□□ 0.4
CDH23-204ENST00000398792 GLUD2P49448 558 aa17.58■□□□□ 0.4
CDH23-204ENST00000398792 MAP3K7CLP57077 242 aa17.58■□□□□ 0.4
CDH23-204ENST00000398792 DSG1Q02413 1049 aa17.58■□□□□ 0.4
CDH23-204ENST00000398792 ZNF268Q14587 947 aaPredicted RBP17.58■□□□□ 0.4
CDH23-204ENST00000398792 NFE2Q16621 373 aaPredicted RBP17.58■□□□□ 0.4
CDH23-204ENST00000398792 CFAP221Q4G0U5 840 aa17.58■□□□□ 0.4
CDH23-204ENST00000398792 PPP1R15BQ5SWA1 713 aa17.58■□□□□ 0.4
CDH23-204ENST00000398792 ZNF592Q92610 1267 aa17.58■□□□□ 0.4
CDH23-204ENST00000398792 MCRS1Q96EZ8 462 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms