RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SETD4Q9NVD3 440 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 LSM7Q9UK45 103 aaKnown RBP14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 FRMD3A2A2Y4 597 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 UBA1P22314 1058 aaKnown RBP14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 SERPINB4P48594 390 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 EFTUD2Q15029 972 aaKnown RBP eCLIP14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 WDR59Q6PJI9 974 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 NOP9Q86U38 636 aaKnown RBP14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 ZBTB45Q96K62 511 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 WDCPQ9H6R7 721 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 KLC4Q9NSK0 619 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 C20orf96Q9NUD7 363 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 ABCF3Q9NUQ8 709 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 ARHGEF38Q9NXL2 777 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 L3MBTL1Q9Y468 752 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 PCDHA3Q9Y5H8 950 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 KPNA6O60684 536 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 ZNF286BP0CG31 522 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 SLC2A3P11169 496 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 IL1RL1Q01638 556 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 KCNMA1Q12791 1236 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 ZNF268Q14587 947 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 MAPRE2Q15555 327 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 ACCSLQ4AC99 568 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 CCNJLQ8IV13 435 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 ARHGAP18Q8N392 663 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 LRRN4CLQ8ND94 238 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 MDM1Q8TC05 714 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 EGFL8Q99944 293 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 NAT9Q9BTE0 207 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 TMEM134Q9H6X4 195 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 GPRC5DQ9NZD1 345 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 CPA4Q9UI42 421 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 GGT7Q9UJ14 662 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 MYPNQ86TC9 1320 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 ZC3H4Q9UPT8 1303 aaKnown RBP14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 TISP43B9A030 160 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 TRIM49D1C9J1S8 452 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 THP07101 528 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 HNRNPH3P31942 346 aaKnown RBP14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 VGLL4Q14135 290 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 NT5DC4Q86YG4 428 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 SPDYE1Q8NFV5 336 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 TRIM54Q9BYV2 358 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 EML4Q9HC35 981 aaKnown RBP14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 FAM8A1Q9UBU6 413 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 CCDC78A2IDD5 438 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 BMT2Q1RMZ1 405 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 FAXCQ5TGI0 409 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 GANQ9H2C0 597 aa14.81□□□□□ -0.04
PCDHGA11-201ENST00000398587 NEMP1O14524 444 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 FBXO21O94952 628 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 GFAPP14136 432 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 TRADDQ15628 312 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 ZNF662Q6ZS27 426 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 CHSY1Q86X52 802 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 C3orf20Q8ND61 904 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 IPMKQ8NFU5 416 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 EPS8L3Q8TE67 593 aaKnown RBP14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 TRAPPC12Q8WVT3 735 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 BAP1Q92560 729 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 SUDS3Q9H7L9 328 aaPredicted RBP14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 CYP4F11Q9HBI6 524 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 USP20Q9Y2K6 914 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 EPHB6O15197 1021 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 TRPA1O75762 1119 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 CYBBP04839 570 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 ADORA2AP29274 412 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 AP2B1P63010 937 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 ERVK-9P63128 1117 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 BST2Q10589 180 aaKnown RBP14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 HABP4Q5JVS0 413 aaKnown RBP14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 TEDDM1Q5T9Z0 273 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 LINC00523Q86TU6 105 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 AGGF1Q8N302 714 aaeCLIP14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 TMEM161BQ8NDZ6 487 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 STKLD1Q8NE28 680 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 AGR3Q8TD06 166 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 EPS8L1Q8TE68 723 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 ERP27Q96DN0 273 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 NFASCO94856 1347 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 CCT8L1PA6NM43 557 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 ANXA9O76027 345 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 PAEPP09466 180 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 IMPG1Q17R60 797 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 SLC27A1Q6PCB7 646 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 SLFN11Q7Z7L1 901 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 TMEM121Q9BTD3 319 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 KCTD10Q9H3F6 313 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 NDFIP2Q9NV92 336 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 ABI2Q9NYB9 513 aaPredicted RBP14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 NID2Q14112 1375 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 PYGMP11217 842 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 KRT4P19013 534 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 PGM1P36871 562 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 LHX1P48742 406 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 MAP1SQ66K74 1059 aaPredicted RBP14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 IL31Q6EBC2 164 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 IL31RAQ8NI17 732 aa14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 AP4E1Q9UPM8 1137 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms