RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 UBA3Q8TBC4 463 aa16.09■□□□□ 0.17
SUMO3-203ENST00000397898 SPPL2BQ8TCT7 592 aa16.09■□□□□ 0.17
SUMO3-203ENST00000397898 C2orf15Q8WU43 125 aaKnown RBP16.09■□□□□ 0.17
SUMO3-203ENST00000397898 MRPL38Q96DV4 380 aaKnown RBP16.09■□□□□ 0.17
SUMO3-203ENST00000397898 SMARCD1Q96GM5 515 aa16.09■□□□□ 0.17
SUMO3-203ENST00000397898 PCDHB18PQ96TA0 734 aa16.09■□□□□ 0.17
SUMO3-203ENST00000397898 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.09■□□□□ 0.17
SUMO3-203ENST00000397898 DUSP16Q9BY84 665 aa16.09■□□□□ 0.17
SUMO3-203ENST00000397898 DEF6Q9H4E7 631 aa16.09■□□□□ 0.17
SUMO3-203ENST00000397898 ABCB6Q9NP58 842 aa16.09■□□□□ 0.17
SUMO3-203ENST00000397898 AFF4Q9UHB7 1163 aaKnown RBP16.09■□□□□ 0.17
SUMO3-203ENST00000397898 ADAMTS1Q9UHI8 967 aa16.09■□□□□ 0.17
SUMO3-203ENST00000397898 ATP8B3O60423 1300 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 DDX3XO00571 662 aaKnown RBP eCLIP16.08■□□□□ 0.171e-23■■■■□ 23.3
SUMO3-203ENST00000397898 TGM5O43548 720 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 FAM200BP0CF97 657 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 CYP2F1P24903 491 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 BCAT1P54687 386 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 GRIN2CQ14957 1233 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 PKDCCQ504Y2 493 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 ADGRD2Q7Z7M1 963 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 CCDC42Q96M95 316 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 LHX5Q9H2C1 402 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 CRISPLD1Q9H336 500 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 PRDM12Q9H4Q4 367 aa16.08■□□□□ 0.17
SUMO3-203ENST00000397898 SOWAHDA6NJG2 315 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 AP1G2O75843 785 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 NPR3P17342 541 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 ANXA13P27216 316 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 GPD2P43304 727 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 CACNA2D1P54289 1103 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 BST2Q10589 180 aaKnown RBP16.08■□□□□ 0.16
SUMO3-203ENST00000397898 DUSP4Q13115 394 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 ASTE1Q2TB18 679 aaPredicted RBP16.08■□□□□ 0.16
SUMO3-203ENST00000397898 ZNF697Q5TEC3 545 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 TRIM72Q6ZMU5 477 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 CLEC20AQ6ZU45 233 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 WDTC1Q8N5D0 677 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 TTC9BQ8N6N2 239 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 SLC30A5Q8TAD4 765 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 SECISBP2LQ93073 1101 aaKnown RBP16.08■□□□□ 0.16
SUMO3-203ENST00000397898 TMEM30AQ9NV96 361 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 SLC27A5Q9Y2P5 690 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 CEP83Q9Y592 693 aa16.08■□□□□ 0.16
SUMO3-203ENST00000397898 A0A087X0T9 212 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 PER2O15055 1255 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 AKR1B10O60218 316 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 CLASP2O75122 1294 aaKnown RBP16.07■□□□□ 0.16
SUMO3-203ENST00000397898 BEST1O76090 585 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 GLUD1P00367 558 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 CYP1A1P04798 512 aaPredicted RBP16.07■□□□□ 0.16
SUMO3-203ENST00000397898 SPATA31D3P0C874 917 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 FAM228BP0C875 321 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 GRIK1P39086 918 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 MAGEA11P43364 429 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 CLCN4P51793 760 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 KIF11P52732 1056 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 MAP3K7CLP57077 242 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 SLC8A3P57103 927 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 PDE4CQ08493 712 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 MGAT5BQ3V5L5 792 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 LILRA6Q6PI73 481 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 VSTM1Q6UX27 236 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 SPATA31D4Q6ZUB0 917 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 RBM23Q86U06 439 aaKnown RBP16.07■□□□□ 0.16
SUMO3-203ENST00000397898 TMEM35BQ8NCS4 154 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 KCNK16Q96T55 309 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 SMOQ99835 787 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 CSNK1G1Q9HCP0 422 aa16.07■□□□□ 0.16
SUMO3-203ENST00000397898 TULP2O00295 520 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 SEC24AO95486 1093 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 LSM8O95777 96 aaKnown RBP16.06■□□□□ 0.16
SUMO3-203ENST00000397898 SETSIPP0DME0 302 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 HAPLN1P10915 354 aaPredicted RBP16.06■□□□□ 0.16
SUMO3-203ENST00000397898 UNGP13051 313 aaPredicted RBP16.06■□□□□ 0.16
SUMO3-203ENST00000397898 CDH5P33151 784 aaPredicted RBP16.06■□□□□ 0.16
SUMO3-203ENST00000397898 NOMO3P69849 1222 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 GFPT1Q06210 699 aaPredicted RBP16.06■□□□□ 0.16
SUMO3-203ENST00000397898 CLEC16AQ2KHT3 1053 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 SCN4BQ8IWT1 228 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 CCDC170Q8IYT3 715 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 C17orf53Q8N3J3 647 aaPredicted RBP16.06■□□□□ 0.16
SUMO3-203ENST00000397898 C1orf131Q8NDD1 294 aaKnown RBP16.06■□□□□ 0.16
SUMO3-203ENST00000397898 ZMIZ2Q8NF64 920 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 SLC35F5Q8WV83 523 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 SEPT5Q99719 369 aaPredicted RBP16.06■□□□□ 0.16
SUMO3-203ENST00000397898 TLE6Q9H808 572 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 CYP4F11Q9HBI6 524 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 DMAP1Q9NPF5 467 aaPredicted RBP16.06■□□□□ 0.16
SUMO3-203ENST00000397898 SPTLC3Q9NUV7 552 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 HSFX1Q9UBD0 423 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 MAFFQ9ULX9 164 aa16.06■□□□□ 0.16
SUMO3-203ENST00000397898 FAM170AA1A519 330 aa16.05■□□□□ 0.16
SUMO3-203ENST00000397898 F8VP50 259 aa16.05■□□□□ 0.16
SUMO3-203ENST00000397898 XPO1O14980 1071 aaKnown RBP16.05■□□□□ 0.16
SUMO3-203ENST00000397898 ELF1P32519 619 aa16.05■□□□□ 0.16
SUMO3-203ENST00000397898 MTF1Q14872 753 aa16.05■□□□□ 0.16
SUMO3-203ENST00000397898 SLC18A3Q16572 532 aa16.05■□□□□ 0.16
SUMO3-203ENST00000397898 NAA35Q5VZE5 725 aa16.05■□□□□ 0.16
SUMO3-203ENST00000397898 RAD9BQ6WBX8 426 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms