RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 NOMO3P69849 1222 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 BBS9Q3SYG4 887 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 DRICH1Q6PGQ1 229 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-206ENST00000397163 SPOCD1Q6ZMY3 1216 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 LDHDQ86WU2 507 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 GPD1LQ8N335 351 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 SLC25A41Q8N5S1 370 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 BANPQ8N9N5 519 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 CHURC1Q8WUH1 139 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 FAM111AQ96PZ2 611 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 FNBP1Q96RU3 617 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 TTC1Q99614 292 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 C10orf88Q9H8K7 445 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 GINM1Q9NU53 330 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 PARVAQ9NVD7 372 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 DDX18Q9NVP1 670 aaKnown RBP9.6□□□□□ -0.87
CAPN3-206ENST00000397163 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-206ENST00000397163 ZNF510Q9Y2H8 683 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 B2RBV5 119 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 NDC80O14777 642 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 ZC3H11AO75152 810 aaKnown RBP eCLIP9.6□□□□□ -0.87
CAPN3-206ENST00000397163 BGNP21810 368 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 UGCGQ16739 394 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 LIN52Q52LA3 116 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 ANKRD22Q5VYY1 191 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 PLEKHA7Q6IQ23 1121 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 ADGRD1Q6QNK2 874 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 TRIM72Q6ZMU5 477 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 SATL1Q86VE3 508 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 SPATA24Q86W54 205 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 ABRAQ8N0Z2 381 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 ZNF276Q8N554 614 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 FBXO36Q8NEA4 188 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 IL31RAQ8NI17 732 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 AZIN2Q96A70 460 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 SKA1Q96BD8 255 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 ANGPTL2Q9UKU9 493 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 DRG1Q9Y295 367 aaKnown RBP9.6□□□□□ -0.87
CAPN3-206ENST00000397163 IKBKGQ9Y6K9 419 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 UBR3Q6ZT12 1888 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 SPDYE16A6NNV3 312 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-206ENST00000397163 H3BRJ5 948 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 DNAJC6O75061 913 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 HLA-DRAP01903 254 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 SOX10P56693 466 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 SPP2Q13103 211 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 KRT72Q14CN4 511 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 CCDC142Q17RM4 750 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 MSS51Q4VC12 460 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 FNBP1LQ5T0N5 605 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 C6orf163Q5TEZ5 329 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 SLC39A4Q6P5W5 647 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 DCUN1D2Q6PH85 259 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 CCDC110Q8TBZ0 833 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 OXNAD1Q96HP4 312 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-206ENST00000397163 CSRNP1Q96S65 589 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 ACSS3Q9H6R3 686 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 TDRD3Q9H7E2 651 aaKnown RBP9.6□□□□□ -0.87
CAPN3-206ENST00000397163 PDP2Q9P2J9 529 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 TDRKHQ9Y2W6 561 aaKnown RBP9.6□□□□□ -0.87
CAPN3-206ENST00000397163 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.6□□□□□ -0.87
CAPN3-206ENST00000397163 DHX15O43143 795 aaKnown RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 RNASEH1O60930 286 aaKnown RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 CIB2O75838 187 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 PGM3O95394 542 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 ENO1P06733 434 aaKnown RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 RARBP10826 455 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 MTMR2Q13614 643 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 OASLQ15646 514 aaKnown RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 PCGF5Q86SE9 256 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 PPIL6Q8IXY8 311 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 NMUR2Q9GZQ4 415 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 KCNK13Q9HB14 408 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 AGO4Q9HCK5 861 aaKnown RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 FBXO28Q9NVF7 368 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 SAE1Q9UBE0 346 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 AGTPBP1Q9UPW5 1226 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 ASTN2O75129 1339 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 FAM237BA0A1B0GVD1 139 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 A8MXQ7 604 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 F8VP50 259 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 SOCS7O14512 581 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 ITGAVP06756 1048 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 GRIA2P42262 883 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 GALK1P51570 392 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 TTLL12Q14166 644 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 TXNRD3NBQ6F5E7 133 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 DUS1LQ6P1R4 473 aaKnown RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 DNAJC14Q6Y2X3 702 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 SDCCAG8Q86SQ7 713 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 ALYREFQ86V81 257 aaKnown RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 PHF13Q86YI8 300 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 VCPIP1Q96JH7 1222 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 CLPTM1LQ96KA5 538 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 FBXL18Q96ME1 805 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 MCEEQ96PE7 176 aa9.59□□□□□ -0.87
CAPN3-206ENST00000397163 IQCGQ9H095 443 aaKnown RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 HSFX1Q9UBD0 423 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms