RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 STAU1O95793 577 aaKnown RBP9.47□□□□□ -0.89
ATG4A-205ENST00000394892 NR3C1P04150 777 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 ARSAP15289 507 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 TNNI1P19237 187 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 BDNFP23560 247 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 PCSK1P29120 753 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 CDC25CP30307 473 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 SYKP43405 635 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 RAP1GAPP47736 663 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 PGFP49763 221 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 NRLP54845 237 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 MCCD1P59942 119 aaPredicted RBP9.47□□□□□ -0.89
ATG4A-205ENST00000394892 MYL7Q01449 175 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 MYO1EQ12965 1108 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 WDR72Q3MJ13 1102 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 MDH1BQ5I0G3 518 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 TRIM68Q6AZZ1 485 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 PKN3Q6P5Z2 889 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 Q6ZS52 159 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 HS2ST1Q7LGA3 356 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 SCN4BQ8IWT1 228 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 MYCBPAPQ8TBZ2 947 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 FAM3CQ92520 227 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 TRMT2BQ96GJ1 504 aaKnown RBP9.47□□□□□ -0.89
ATG4A-205ENST00000394892 FUBP3Q96I24 572 aaKnown RBP eCLIP9.47□□□□□ -0.89
ATG4A-205ENST00000394892 B3GNT5Q9BYG0 378 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 ZNF518BQ9C0D4 1074 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 CHRDQ9H2X0 955 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 VRTNQ9H8Y1 702 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 LMAN1LQ9HAT1 526 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 PRMT8Q9NR22 394 aaPredicted RBP9.47□□□□□ -0.89
ATG4A-205ENST00000394892 EXOC1Q9NV70 894 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 OBP2AQ9NY56 170 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 HMGXB4Q9UGU5 601 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 GMEB2Q9UKD1 530 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 CDH9Q9ULB4 789 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 USP18Q9UMW8 372 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 MAGED2Q9UNF1 606 aaPredicted RBP9.47□□□□□ -0.89
ATG4A-205ENST00000394892 MAPK8IP1Q9UQF2 711 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 TRAF3IP3Q9Y228 551 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 EP300Q09472 2414 aaPredicted RBP9.46□□□□□ -0.89
ATG4A-205ENST00000394892 CACNA1IQ9P0X4 2223 aa9.46□□□□□ -0.89
ATG4A-205ENST00000394892 SPECC1L-ADORA2AF8WAN1 911 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 AKAP3O75969 853 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 ZNF202O95125 648 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 FGF19O95750 216 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 CSH1P0DML2 217 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 CSH2P0DML3 217 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 PTPN1P18031 435 aaKnown RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 CTHP32929 405 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 GNL1P36915 607 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 MLLT6P55198 1093 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 PPP3CAQ08209 521 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 DMWDQ09019 674 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 PSMD2Q13200 908 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 VEPH1Q14D04 833 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 ZACNQ401N2 412 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 SPOPLQ6IQ16 392 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 MAMSTRQ6ZN01 415 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 SV2AQ7L0J3 742 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 SPATA2LQ8IUW3 424 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 SMYD4Q8IYR2 804 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 FMR1NBQ8N0W7 255 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 ZBTB44Q8NCP5 570 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 ENGASEQ8NFI3 743 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 BPIFB1Q8TDL5 484 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 EZH1Q92800 747 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 ERCC4Q92889 916 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 E2F7Q96AV8 911 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 FNBP1Q96RU3 617 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 MMS19Q96T76 1030 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 RTKNQ9BST9 563 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 TTLL2Q9BWV7 592 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 APOBEC3GQ9HC16 384 aaKnown RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 GKN1Q9NS71 199 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 POLR3BQ9NW08 1133 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 CGNQ9P2M7 1197 aaKnown RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 NXF1Q9UBU9 619 aaKnown RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 USP25Q9UHP3 1055 aa9.46□□□□□ -0.9
ATG4A-205ENST00000394892 SMG5Q9UPR3 1016 aaKnown RBP9.46□□□□□ -0.9
ATG4A-205ENST00000394892 F8VP50 259 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 MAN2B1O00754 1011 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 LILRB5O75023 590 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 FAM163BP0C2L3 166 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 TRIM49P0CI25 452 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 TRIM49CP0CI26 452 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 ATXN1P54253 815 aaKnown RBP9.45□□□□□ -0.9
ATG4A-205ENST00000394892 RPL10AP62906 217 aaKnown RBP9.45□□□□□ -0.9
ATG4A-205ENST00000394892 SATB1Q01826 763 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 ORC1Q13415 861 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 PNOCQ13519 176 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 NCOA4Q13772 614 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 CCINQ13939 588 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 PON2Q15165 354 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 ZNF77Q15935 545 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 GAB4Q2WGN9 574 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 ARHGAP29Q52LW3 1261 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 ARHGAP15Q53QZ3 475 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 CELF5Q8N6W0 485 aaKnown RBP9.45□□□□□ -0.9
ATG4A-205ENST00000394892 ARL14EPQ8N8R7 260 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms