RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 KANSL3Q9P2N6 904 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 FETUBQ9UGM5 382 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 KCNG1Q9UIX4 513 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 ZMYND8Q9ULU4 1186 aaPredicted RBP19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 WDR91A4D1P6 747 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 TRAFD1O14545 582 aaPredicted RBP19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 ASS1P00966 412 aaKnown RBP19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 TPBGLP0DKB5 382 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 ARL2P36404 184 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 DYNLT1P63172 113 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 ZNF394Q53GI3 561 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 GPAT2Q6NUI2 795 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 ADGRD1Q6QNK2 874 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 PCGF5Q86SE9 256 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 PPIL6Q8IXY8 311 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 NAT8LQ8N9F0 302 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 TMEM35BQ8NCS4 154 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 PYROXD1Q8WU10 500 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 PAFAH2Q99487 392 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 TRIM6Q9C030 488 aaPredicted RBP19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 C12orf65Q9H3J6 166 aaKnown RBP19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 DHX33Q9H6R0 707 aaKnown RBP19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 ZFP69BQ9UJL9 534 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 SKAP2O75563 359 aaPredicted RBP19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 ABL2P42684 1182 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 OTUD4Q01804 1114 aaKnown RBP19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 ATP11CQ8NB49 1132 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 ACTL9Q8TC94 416 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 IMPG2Q9BZV3 1241 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 HOXC10Q9NYD6 342 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 PHBP35232 272 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 ARL4CP56559 192 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 TAP1Q03518 808 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 CTC1Q2NKJ3 1217 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 ZC3H12AQ5D1E8 599 aaKnown RBP19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 FYB2Q5VWT5 728 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 MTDHQ86UE4 582 aaKnown RBP19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 RHPN2Q8IUC4 686 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 RFWD2Q8NHY2 731 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 TCP10LQ8TDR4 215 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 ANKRD27Q96NW4 1050 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 TEX13BQ9BXU2 312 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 PHACTR1Q9C0D0 580 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 ACSS3Q9H6R3 686 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 BTBD7Q9P203 1132 aa19.24■□□□□ 0.67
PCDHA1-202ENST00000394633 TCRBV7S3A2A0A539 114 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 SPATA31C2B4DYI2 1134 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 CXCL11O14625 94 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 SMNDC1O75940 238 aaKnown RBP eCLIP19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 TNFSF9P41273 254 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 RASSF2P50749 326 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 SP2Q02086 613 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 SMTNL2Q2TAL5 461 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 C3orf62Q6ZUJ4 267 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 TTC8Q8TAM2 541 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 ZNF398Q8TD17 642 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 DCAKDQ8WVC6 231 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 TFAP2BQ92481 460 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 NAF1Q96HR8 494 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 NUDCD1Q96RS6 583 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 R3HDMLQ9H3Y0 253 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 TLE6Q9H808 572 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 SLC17A7Q9P2U7 560 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 LNPEPQ9UIQ6 1025 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 MGAMO43451 1857 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 TTLL13PA6NNM8 815 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 E7ESA3 106 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 CELF2O95319 508 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 OATP04181 439 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 PTPN4P29074 926 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 RPL22P35268 128 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 RAD23BP54727 409 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 MYL6P60660 151 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 SLC25A11Q02978 314 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 OVGP1Q12889 678 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 BLMHQ13867 455 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 WASHC2DQ5SRD0 308 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 POLNQ7Z5Q5 900 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 CLNKQ7Z7G1 428 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 TAB3Q8N5C8 712 aaPredicted RBP19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 ARFGAP1Q8N6T3 406 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 ENDOVQ8N8Q3 282 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 FBXO36Q8NEA4 188 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 CDHR1Q96JP9 859 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 KLF6Q99612 283 aaPredicted RBP19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 ZNF518BQ9C0D4 1074 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 ASCC2Q9H1I8 757 aaPredicted RBP19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 ZWILCHQ9H900 591 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 SAR1AQ9NR31 198 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 CISHQ9NSE2 258 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 AGTPBP1Q9UPW5 1226 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 LRRC42Q9Y546 428 aa19.23■□□□□ 0.67
PCDHA1-202ENST00000394633 E7ENQ6 273 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 GOLGA8RI6L899 631 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 CST8O60676 142 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 IL1R2P27930 398 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 CDH5P33151 784 aaPredicted RBP19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 PSEN1P49768 467 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 OAZ1P54368 228 aa19.22■□□□□ 0.67
PCDHA1-202ENST00000394633 MTM1Q13496 603 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms