RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TFDP3Q5H9I0 405 aa14.17□□□□□ -0.14
GTF2F1-201ENST00000394456 IER5Q5VY09 327 aa14.17□□□□□ -0.14
GTF2F1-201ENST00000394456 ARHGEF18Q6ZSZ5 1173 aa14.17□□□□□ -0.14
GTF2F1-201ENST00000394456 CCDC91Q7Z6B0 441 aa14.17□□□□□ -0.14
GTF2F1-201ENST00000394456 IGDCC3Q8IVU1 814 aa14.17□□□□□ -0.14
GTF2F1-201ENST00000394456 RBM41Q96IZ5 413 aaKnown RBP14.17□□□□□ -0.14
GTF2F1-201ENST00000394456 PIWIL1Q96J94 861 aaKnown RBP14.17□□□□□ -0.14
GTF2F1-201ENST00000394456 ACO2Q99798 780 aaKnown RBP14.17□□□□□ -0.14
GTF2F1-201ENST00000394456 NCAPGQ9BPX3 1015 aa14.17□□□□□ -0.14
GTF2F1-201ENST00000394456 IMPG2Q9BZV3 1241 aa14.17□□□□□ -0.14
GTF2F1-201ENST00000394456 RNPEPQ9H4A4 650 aa14.17□□□□□ -0.14
GTF2F1-201ENST00000394456 PDHXO00330 501 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 LDHAP00338 332 aaKnown RBP14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 PRKCBP05771 671 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 CXCL8P10145 99 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 SLC25A11Q02978 314 aaKnown RBP14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 TTLL4Q14679 1199 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 ZNF699Q32M78 642 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 TMEM35BQ8NCS4 154 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 CPT1BQ92523 772 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 MRPL4Q9BYD3 311 aaKnown RBP14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 METTL5Q9NRN9 209 aaKnown RBP14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 PHTF1Q9UMS5 762 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 CHKBQ9Y259 395 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 ERBB2P04626 1255 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 CA4P22748 312 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 TARSP26639 723 aaKnown RBP14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 ADORA2AP29274 412 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 RPL22P35268 128 aaKnown RBP14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 GCLCP48506 637 aaPredicted RBP14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 OVGP1Q12889 678 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 MYO1EQ12965 1108 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 PLPPR4Q7Z2D5 763 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 RELL1Q8IUW5 271 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 SLC35B2Q8TB61 432 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 HSPH1Q92598 858 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 ERP27Q96DN0 273 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 CFAP57Q96MR6 1250 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 CCDC77Q9BR77 488 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 SMYD3Q9H7B4 428 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 SCN4AP35499 1836 aa14.16□□□□□ -0.14
GTF2F1-201ENST00000394456 INO80B-WBP1J3KQ70 363 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 TOM1L1O75674 476 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 TRPC3Q13507 836 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 MAPK6Q16659 721 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 WDR49Q8IV35 697 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 FAM71DQ8N9W8 422 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 GPRC5AQ8NFJ5 357 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 INO80BQ9C086 356 aaPredicted RBP14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 RXFP1Q9HBX9 757 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 CPSF3Q9UKF6 684 aaKnown RBP14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 CCL15-CCL14A0A0B4J2E2 113 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 ALOX15BO15296 676 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 AVILO75366 819 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 GRAP2O75791 330 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 CALB1P05937 261 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 NFICP08651 508 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 KRT4P19013 534 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 ADRA1DP25100 572 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 EFNA5P52803 228 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 PSMC1P62191 440 aaKnown RBP14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 CCL15Q16663 113 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 TMEM132AQ24JP5 1023 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 EFCAB12Q6NXP0 572 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 ZBTB8OSQ8IWT0 167 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 BBOF1Q8ND07 529 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 UBA3Q8TBC4 463 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 SMARCAD1Q9H4L7 1026 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 SLC17A7Q9P2U7 560 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 SIX4Q9UIU6 781 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 HAO1Q9UJM8 370 aa14.15□□□□□ -0.14
GTF2F1-201ENST00000394456 IGKV6-21A0A0C4DH24 114 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 BTBD19C9JJ37 291 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ABHD2P08910 425 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 KRT3P12035 628 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 IL9RQ01113 521 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ENPEPQ07075 957 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 MXD4Q14582 209 aaPredicted RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 DUOXA2Q1HG44 320 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 BBS9Q3SYG4 887 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 PLEKHG4Q58EX7 1191 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 CDCA2Q69YH5 1023 aaPredicted RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ZNF449Q6P9G9 518 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 LVRNQ6Q4G3 990 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ZPBP2Q6X784 338 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ASRGL1Q7L266 308 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 CCDC33Q8N5R6 958 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 N4BP2L2Q92802 583 aaPredicted RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 KCNN1Q92952 543 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 PEBP4Q96S96 227 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 TACO1Q9BSH4 297 aaKnown RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ETNK1Q9HBU6 452 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 RNF19AQ9NV58 838 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 KLHL14Q9P2G3 628 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 RABGEF1Q9UJ41 708 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 FARP1Q9Y4F1 1045 aaPredicted RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 KAT6AQ92794 2004 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ASB14A6NK59 587 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 EIF4E1BA6NMX2 242 aaKnown RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 OGTO15294 1046 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms