RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 GALR2O43603 387 aaPredicted RBP32.74■■■□□ 2.83
CMTM4-202ENST00000394106 PRAMEF12O95522 483 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 CD44P16070 742 aaKnown RBP32.74■■■□□ 2.83
CMTM4-202ENST00000394106 CCNE1P24864 410 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 GTF2H1P32780 548 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 ASPAP45381 313 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 NUBP1P53384 320 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 PTPN5P54829 565 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 NOP14P78316 857 aaKnown RBP32.74■■■□□ 2.83
CMTM4-202ENST00000394106 TCF15Q12870 199 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 KRT39Q6A163 491 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 TXNDC8Q6A555 127 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 KLHL10Q6JEL2 608 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 IRF7Q92985 503 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 DHTKD1Q96HY7 919 aaPredicted RBP32.74■■■□□ 2.83
CMTM4-202ENST00000394106 TNIP3Q96KP6 325 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 SPATA17Q96L03 361 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 MYRFLQ96LU7 910 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 ELOVL4Q9GZR5 314 aa32.74■■■□□ 2.83
CMTM4-202ENST00000394106 F8VP50 259 aa32.73■■■□□ 2.83
CMTM4-202ENST00000394106 SLC16A3O15427 465 aaKnown RBP32.73■■■□□ 2.83
CMTM4-202ENST00000394106 STX10O60499 249 aa32.73■■■□□ 2.83
CMTM4-202ENST00000394106 ORC1Q13415 861 aa32.73■■■□□ 2.83
CMTM4-202ENST00000394106 DCAF17Q5H9S7 520 aaPredicted RBP32.73■■■□□ 2.83
CMTM4-202ENST00000394106 TCERG1LQ5VWI1 586 aa32.73■■■□□ 2.83
CMTM4-202ENST00000394106 TPRG1Q6ZUI0 275 aa32.73■■■□□ 2.83
CMTM4-202ENST00000394106 ACOT1Q86TX2 421 aa32.73■■■□□ 2.83
CMTM4-202ENST00000394106 ZC3H3Q8IXZ2 948 aaKnown RBP32.73■■■□□ 2.83
CMTM4-202ENST00000394106 CMTM8Q8IZV2 173 aa32.73■■■□□ 2.83
CMTM4-202ENST00000394106 CCDC150Q8NCX0 1101 aa32.73■■■□□ 2.83
CMTM4-202ENST00000394106 MED10Q9BTT4 135 aa32.73■■■□□ 2.83
CMTM4-202ENST00000394106 APOBEC3GQ9HC16 384 aaKnown RBP32.73■■■□□ 2.83
CMTM4-202ENST00000394106 SIT1Q9Y3P8 196 aa32.73■■■□□ 2.83
CMTM4-202ENST00000394106 TADA3O75528 432 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 CD72P21854 359 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 BMP6P22004 513 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 DDX6P26196 483 aaKnown RBP eCLIP32.72■■■□□ 2.83
CMTM4-202ENST00000394106 PPP1R2P41236 205 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 MXI1P50539 228 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 NDST1P52848 882 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 NHLH1Q02575 133 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 MORC3Q14149 939 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 HMGXB4Q9UGU5 601 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 ZMYM5Q9UJ78 669 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 GREB1Q4ZG55 1949 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 TICRRQ7Z2Z1 1910 aa32.72■■■□□ 2.83
CMTM4-202ENST00000394106 KANSL1LA0AUZ9 987 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 LRRN2O75325 713 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 DCNP07585 359 aaKnown RBP32.71■■■□□ 2.83
CMTM4-202ENST00000394106 WEE1P30291 646 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 AVPR1AP37288 418 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 CACNA2D1P54289 1103 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 MCCD1P59942 119 aaPredicted RBP32.71■■■□□ 2.83
CMTM4-202ENST00000394106 DENND5BQ6ZUT9 1274 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 PJA1Q8NG27 643 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 C8orf48Q96LL4 319 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 LRRC3BQ96PB8 259 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 BCO2Q9BYV7 579 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 TRPC7Q9HCX4 862 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 WDFY4Q6ZS81 3184 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 ATP8B3O60423 1300 aa32.71■■■□□ 2.83
CMTM4-202ENST00000394106 UBXN2BQ14CS0 331 aa32.7■■■□□ 2.83
CMTM4-202ENST00000394106 CAMK4Q16566 473 aa32.7■■■□□ 2.83
CMTM4-202ENST00000394106 MON1AQ86VX9 555 aa32.7■■■□□ 2.83
CMTM4-202ENST00000394106 CCDC105Q8IYK2 499 aa32.7■■■□□ 2.83
CMTM4-202ENST00000394106 NELFBQ8WX92 580 aa32.7■■■□□ 2.83
CMTM4-202ENST00000394106 SEMA4DQ92854 862 aa32.7■■■□□ 2.83
CMTM4-202ENST00000394106 CEP295NLQ96MC4 621 aa32.7■■■□□ 2.83
CMTM4-202ENST00000394106 DDX23Q9BUQ8 820 aaKnown RBP32.7■■■□□ 2.83
CMTM4-202ENST00000394106 NIF3L1Q9GZT8 377 aa32.7■■■□□ 2.83
CMTM4-202ENST00000394106 TMEM30AQ9NV96 361 aa32.7■■■□□ 2.83
CMTM4-202ENST00000394106 OBP2AQ9NY56 170 aa32.7■■■□□ 2.83
CMTM4-202ENST00000394106 CTNND2Q9UQB3 1225 aa32.7■■■□□ 2.83
CMTM4-202ENST00000394106 ZNF638Q14966 1978 aaKnown RBP32.7■■■□□ 2.82
CMTM4-202ENST00000394106 PPP1R3GB7ZBB8 358 aa32.69■■■□□ 2.82
CMTM4-202ENST00000394106 USP46P62068 366 aa32.69■■■□□ 2.82
CMTM4-202ENST00000394106 FCHO2Q0JRZ9 810 aa32.69■■■□□ 2.82
CMTM4-202ENST00000394106 FAM35AQ86V20 835 aa32.69■■■□□ 2.82
CMTM4-202ENST00000394106 UNC93AQ86WB7 457 aa32.69■■■□□ 2.82
CMTM4-202ENST00000394106 CELF5Q8N6W0 485 aaKnown RBP32.69■■■□□ 2.82
CMTM4-202ENST00000394106 DTWD2Q8NBA8 298 aa32.69■■■□□ 2.82
CMTM4-202ENST00000394106 ARMCX3Q9UH62 379 aaPredicted RBP32.69■■■□□ 2.82
CMTM4-202ENST00000394106 COL4A2P08572 1712 aa32.68■■■□□ 2.82
CMTM4-202ENST00000394106 H0Y858 1186 aa32.68■■■□□ 2.82
CMTM4-202ENST00000394106 CHADO15335 359 aa32.68■■■□□ 2.82
CMTM4-202ENST00000394106 FBXL13Q8NEE6 735 aa32.68■■■□□ 2.82
CMTM4-202ENST00000394106 BPIFB1Q8TDL5 484 aa32.68■■■□□ 2.82
CMTM4-202ENST00000394106 CSGALNACT1Q8TDX6 532 aa32.68■■■□□ 2.82
CMTM4-202ENST00000394106 ZFYVE19Q96K21 471 aa32.68■■■□□ 2.82
CMTM4-202ENST00000394106 CYP3A43Q9HB55 503 aa32.68■■■□□ 2.82
CMTM4-202ENST00000394106 MTF2Q9Y483 593 aaPredicted RBP32.68■■■□□ 2.82
CMTM4-202ENST00000394106 MIA3Q5JRA6 1907 aa32.67■■■□□ 2.82
CMTM4-202ENST00000394106 CCDC130P13994 396 aa32.67■■■□□ 2.82
CMTM4-202ENST00000394106 CD58P19256 250 aa32.67■■■□□ 2.82
CMTM4-202ENST00000394106 IFRD2Q12894 506 aaPredicted RBP32.67■■■□□ 2.82
CMTM4-202ENST00000394106 ZNF852Q6ZMS4 543 aa32.67■■■□□ 2.82
CMTM4-202ENST00000394106 USP13Q92995 863 aaPredicted RBP32.67■■■□□ 2.82
CMTM4-202ENST00000394106 LTB4R2Q9NPC1 389 aa32.67■■■□□ 2.82
CMTM4-202ENST00000394106 TRPV5Q9NQA5 729 aa32.67■■■□□ 2.82
CMTM4-202ENST00000394106 RAB20Q9NX57 234 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms