RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 RNF187Q5TA31 235 aaPredicted RBP7.56□□□□□ -1.2
SMAD1-202ENST00000394092 MAMDC4Q6UXC1 1216 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 PPP1R21Q6ZMI0 780 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 ARHGEF18Q6ZSZ5 1173 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 CENPUQ71F23 418 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 ANKRD23Q86SG2 305 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 TAX1BP1Q86VP1 789 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 CDR2LQ86X02 465 aaPredicted RBP7.56□□□□□ -1.2
SMAD1-202ENST00000394092 MICALL1Q8N3F8 863 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 CCDC197Q8NCU1 140 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 SLC35B2Q8TB61 432 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 MCRS1Q96EZ8 462 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 SEC16BQ96JE7 1060 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 CPXM1Q96SM3 734 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 PARK7Q99497 189 aaKnown RBP7.56□□□□□ -1.2
SMAD1-202ENST00000394092 NT5C1AQ9BXI3 368 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 ADAM7Q9H2U9 754 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 R3HDMLQ9H3Y0 253 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 ABHD16BQ9H3Z7 469 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 TUT1Q9H6E5 874 aaKnown RBP7.56□□□□□ -1.2
SMAD1-202ENST00000394092 RSAD1Q9HA92 442 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 PLEKHA5Q9HAU0 1116 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 UBN1Q9NPG3 1134 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 DPP3Q9NY33 737 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 SENP1Q9P0U3 644 aa7.56□□□□□ -1.2
SMAD1-202ENST00000394092 CCL15-CCL14A0A0B4J2E2 113 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 A0A1B0GUA9 196 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 EXOC1LA0A1B0GW35 172 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 APOC4-APOC2K7ER74 178 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 MCF2LO15068 1137 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 XPOTO43592 962 aaKnown RBP7.55□□□□□ -1.2
SMAD1-202ENST00000394092 APOC2P02655 101 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 VTNP04004 478 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 MMP3P08254 477 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 IQCF3P0C7M6 154 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 ZNF286BP0CG31 522 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 TCF4P15884 667 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 GPD1P21695 349 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 PHBP35232 272 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 GJA5P36382 358 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 ADCYAP1R1P41586 468 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 YARSP54577 528 aaKnown RBP7.55□□□□□ -1.2
SMAD1-202ENST00000394092 FKBP1BP68106 108 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 IFT88Q13099 833 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 TFDP2Q14188 446 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 TAZQ16635 292 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 CCL15Q16663 113 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 SLC10A6Q3KNW5 377 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 DUSP28Q4G0W2 176 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 ATP13A4Q4VNC1 1196 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 FAM47CQ5HY64 1035 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 FAM102AQ5T9C2 384 aaPredicted RBP7.55□□□□□ -1.2
SMAD1-202ENST00000394092 IQSEC1Q6DN90 963 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 LCLAT1Q6UWP7 414 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 C6orf89Q6UWU4 347 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 ILDR2Q71H61 639 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 DPP9Q86TI2 863 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 EXOC3L1Q86VI1 746 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 TDRPQ86YL5 185 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 RFX6Q8HWS3 928 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 MAP7D3Q8IWC1 876 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 PPIL6Q8IXY8 311 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 TMEM192Q8IY95 271 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 OR6J1Q8NGC5 347 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 JOSD2Q8TAC2 188 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 CXorf38Q8TB03 319 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 MDM1Q8TC05 714 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 RSAD2Q8WXG1 361 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 CPB2Q96IY4 423 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 HEXIM2Q96MH2 286 aaKnown RBP7.55□□□□□ -1.2
SMAD1-202ENST00000394092 ZNF317Q96PQ6 595 aaPredicted RBP7.55□□□□□ -1.2
SMAD1-202ENST00000394092 TSPAN18Q96SJ8 248 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 FAM118BQ9BPY3 351 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 PLCD4Q9BRC7 762 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 C16orf70Q9BSU1 422 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 CNPY3Q9BT09 278 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 GCOM2Q9BZD3 368 aaPredicted RBP7.55□□□□□ -1.2
SMAD1-202ENST00000394092 ELOVL4Q9GZR5 314 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 SDCBP2Q9H190 292 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 ZWILCHQ9H900 591 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 LRRC4CQ9HCJ2 640 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 SAYSD1Q9NPB0 183 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 NKIRAS1Q9NYS0 192 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 DDX20Q9UHI6 824 aaKnown RBP7.55□□□□□ -1.2
SMAD1-202ENST00000394092 AGAP1Q9UPQ3 857 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 SCN1AP35498 2009 aa7.55□□□□□ -1.2
SMAD1-202ENST00000394092 TMEM120BA0PK00 339 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 C3orf70A6NLC5 250 aaPredicted RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 CST8O60676 142 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 IFNB1P01574 187 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ERBB2P04626 1255 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 VIMP08670 466 aaKnown RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 GHRP10912 638 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 BRAFP15056 766 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 TSHRP16473 764 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ATP2A2P16615 1042 aaKnown RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 GPD2P43304 727 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 LIG3P49916 1009 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ZNF143P52747 638 aaPredicted RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 NDST1P52848 882 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms