RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PRMT7Q9NVM4 692 aaPredicted RBP11.03□□□□□ -0.64
CALD1-203ENST00000393118 GPRC5DQ9NZD1 345 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 PNMA3Q9UL41 463 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 ZNF541Q9H0D2 1346 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 ASB14A6NK59 587 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 SLC25A27O95847 323 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 CYP2C8P10632 490 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 DYNC1I2Q13409 638 aaKnown RBP11.03□□□□□ -0.64
CALD1-203ENST00000393118 SH2D4BQ5SQS7 431 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 FAM182AQ5T1J6 154 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 ACBD5Q5T8D3 534 aaPredicted RBP11.03□□□□□ -0.64
CALD1-203ENST00000393118 DENND1BQ6P3S1 775 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 PCGF5Q86SE9 256 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 AFG1LQ8WV93 481 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 TEPSINQ96N21 525 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 LRRC4Q9HBW1 653 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 NFASCO94856 1347 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 A0A0B4J269 797 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 IGF2BP3O00425 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
CALD1-203ENST00000393118 C4BPAP04003 597 aaKnown RBP11.03□□□□□ -0.64
CALD1-203ENST00000393118 RBP5P82980 135 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 PDE1BQ01064 536 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 ZPBP2Q6X784 338 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 ACOT1Q86TX2 421 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 ARL10Q8N8L6 244 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 MAML1Q92585 1016 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 ART4Q93070 314 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 ZNF711Q9Y462 761 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 DYNC1LI2O43237 492 aaPredicted RBP11.02□□□□□ -0.64
CALD1-203ENST00000393118 BANF1O75531 89 aa11.02□□□□□ -0.64
CALD1-203ENST00000393118 PTGIRP43119 386 aa11.02□□□□□ -0.64
CALD1-203ENST00000393118 SERPINB4P48594 390 aa11.02□□□□□ -0.64
CALD1-203ENST00000393118 PTPN11Q06124 597 aaPredicted RBP11.02□□□□□ -0.64
CALD1-203ENST00000393118 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.02□□□□□ -0.64
CALD1-203ENST00000393118 FASTKD5Q7L8L6 764 aaKnown RBP11.02□□□□□ -0.64
CALD1-203ENST00000393118 ERO1BQ86YB8 467 aa11.02□□□□□ -0.64
CALD1-203ENST00000393118 MYLK4Q86YV6 388 aaPredicted RBP11.02□□□□□ -0.64
CALD1-203ENST00000393118 LRRC37BQ96QE4 947 aa11.02□□□□□ -0.64
CALD1-203ENST00000393118 NT5C1AQ9BXI3 368 aa11.02□□□□□ -0.64
CALD1-203ENST00000393118 KLC2Q9H0B6 622 aa11.02□□□□□ -0.64
CALD1-203ENST00000393118 GRHL1Q9NZI5 618 aa11.02□□□□□ -0.64
CALD1-203ENST00000393118 KLK14Q9P0G3 267 aa11.02□□□□□ -0.64
CALD1-203ENST00000393118 ARL2BPQ9Y2Y0 163 aa11.02□□□□□ -0.64
CALD1-203ENST00000393118 MROH7Q68CQ1 1323 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 ZC3H4Q9UPT8 1303 aaKnown RBP11.02□□□□□ -0.65
CALD1-203ENST00000393118 IQANK1A0A1B0GTG1 560 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 CCDC195A0A1B0GUA6 201 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 FARP2O94887 1054 aaPredicted RBP11.02□□□□□ -0.65
CALD1-203ENST00000393118 NUDT17P0C025 328 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 TGFB3P10600 412 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 KRT4P19013 534 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 SSTR1P30872 391 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 RASSF2P50749 326 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 KLC1Q07866 573 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 ZDHHC24Q6UX98 284 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 NTPCRQ9BSD7 190 aaKnown RBP11.02□□□□□ -0.65
CALD1-203ENST00000393118 COQ4Q9Y3A0 265 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 NRAPQ86VF7 1730 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 CFAP73A6NFT4 308 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 SKIP12755 728 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 NR1H3Q13133 447 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 PTK6Q13882 451 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 TWF2Q6IBS0 349 aaKnown RBP11.02□□□□□ -0.65
CALD1-203ENST00000393118 ARMCX6Q7L4S7 300 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 EXOC3L1Q86VI1 746 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 PRCCQ92733 491 aaPredicted RBP11.02□□□□□ -0.65
CALD1-203ENST00000393118 SMYD3Q9H7B4 428 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 BTBD7Q9P203 1132 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 WDR35Q9P2L0 1181 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 NOD1Q9Y239 953 aa11.02□□□□□ -0.65
CALD1-203ENST00000393118 KLHL33A6NCF5 533 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 M0QZ92 97 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 COPEO14579 308 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 NFICP08651 508 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 KITP10721 976 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 CREB1P16220 341 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 KLHL38Q2WGJ6 581 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 ERMARDQ5T6L9 678 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 VCPIP1Q96JH7 1222 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 DHX33Q9H6R0 707 aaKnown RBP11.01□□□□□ -0.65
CALD1-203ENST00000393118 PIN4Q9Y237 131 aaKnown RBP11.01□□□□□ -0.65
CALD1-203ENST00000393118 LAMB2P55268 1798 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 LACTBL1A8MY62 500 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 ACKR2O00590 384 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 LPXNO60711 386 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 IL18RAPO95256 599 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 NPTXRO95502 500 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 RTP1P59025 263 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 GOLGA7BQ2TAP0 167 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 LVRNQ6Q4G3 990 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 KATNAL2Q8IYT4 538 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 GBP7Q8N8V2 638 aaPredicted RBP11.01□□□□□ -0.65
CALD1-203ENST00000393118 DNAAF3Q8N9W5 541 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 BEST2Q8NFU1 509 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 LRRN4Q8WUT4 740 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 ERP27Q96DN0 273 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 NUDCD1Q96RS6 583 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 RMI1Q9H9A7 625 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 NPHS2Q9NP85 383 aa11.01□□□□□ -0.65
CALD1-203ENST00000393118 PDGFCQ9NRA1 345 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms