RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 HES2Q9Y543 173 aa26.91■■□□□ 1.9
SMARCD3-203ENST00000392811 PIK3R2O00459 728 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 PFKMP08237 780 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 CYP2C9P11712 490 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 MIPP30301 263 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 IRX5P78411 483 aaPredicted RBP26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 CDC42EP1Q00587 391 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 MORN1Q5T089 497 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 B4GALNT4Q76KP1 1039 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 RELL1Q8IUW5 271 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 MRPL45Q9BRJ2 306 aaKnown RBP26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 TMEM121Q9BTD3 319 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 TUBGCP4Q9UGJ1 667 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 SCN1AP35498 2009 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 SMIM35A0A1B0GVV1 85 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 CD48P09326 243 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 CHN1P15882 459 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 PLCB3Q01970 1234 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 GPS1Q13098 491 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 NOTUMQ6P988 496 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 CENPTQ96BT3 561 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 SERPINB12Q96P63 405 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 FLRT1Q9NZU1 646 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 SAE1Q9UBE0 346 aaPredicted RBP26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 SNX9Q9Y5X1 595 aa26.9■■□□□ 1.9
SMARCD3-203ENST00000392811 MBLAC1A4D2B0 266 aaPredicted RBP26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 E5RJQ4 531 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 CST8O60676 142 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 RNF8O76064 485 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 DARSP14868 501 aaKnown RBP26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 MAP2K5Q13163 448 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 HIC1Q14526 733 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 ACAP1Q15027 740 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 TAF5Q15542 800 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 ZBTB6Q15916 424 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 GOLGA7BQ2TAP0 167 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 OLFML2BQ68BL8 750 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 BBS12Q6ZW61 710 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 C18orf25Q96B23 403 aaPredicted RBP26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 XPO6Q96QU8 1125 aaKnown RBP26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 FOXP3Q9BZS1 431 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 FAM169AQ9Y6X4 670 aa26.89■■□□□ 1.9
SMARCD3-203ENST00000392811 TRUB2O95900 331 aaKnown RBP26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 YARSP54577 528 aaKnown RBP26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 OTUD4Q01804 1114 aaKnown RBP26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 CCDC38Q502W7 563 aa26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 ERMARDQ5T6L9 678 aa26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 OR6B2Q6IFH4 312 aa26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 FAM183BPQ6ZVS7 135 aa26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 TLK2Q86UE8 772 aa26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 ACTL9Q8TC94 416 aa26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 C9orf72Q96LT7 481 aa26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 RBM15Q96T37 977 aaKnown RBP eCLIP26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 ASNSD1Q9NWL6 643 aa26.89■■□□□ 1.89
SMARCD3-203ENST00000392811 SGK1O00141 431 aa26.88■■□□□ 1.89
SMARCD3-203ENST00000392811 ZNF143P52747 638 aaPredicted RBP26.88■■□□□ 1.89
SMARCD3-203ENST00000392811 MFSD10Q14728 455 aa26.88■■□□□ 1.89
SMARCD3-203ENST00000392811 GLRA4Q5JXX5 417 aa26.88■■□□□ 1.89
SMARCD3-203ENST00000392811 TRNP1Q6NT89 227 aa26.88■■□□□ 1.89
SMARCD3-203ENST00000392811 KCTD6Q8NC69 237 aa26.88■■□□□ 1.89
SMARCD3-203ENST00000392811 CMASQ8NFW8 434 aaPredicted RBP26.88■■□□□ 1.89
SMARCD3-203ENST00000392811 PIWIL1Q96J94 861 aaKnown RBP26.88■■□□□ 1.89
SMARCD3-203ENST00000392811 NXF3Q9H4D5 531 aaKnown RBP26.88■■□□□ 1.89
SMARCD3-203ENST00000392811 TPX2Q9ULW0 747 aaKnown RBP26.88■■□□□ 1.89
SMARCD3-203ENST00000392811 USP18Q9UMW8 372 aa26.88■■□□□ 1.89
SMARCD3-203ENST00000392811 GPD1P21695 349 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 CORO7P57737 925 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 STILQ15468 1287 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 PPP1R26Q5T8A7 1209 aaPredicted RBP26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 ACOT1Q86TX2 421 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 HSPH1Q92598 858 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 PCDH9Q9HC56 1237 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 NME7Q9Y5B8 376 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 ZNF865P0CJ78 1059 aaPredicted RBP26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 MAGEA4P43358 317 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 SH3PXD2AQ5TCZ1 1133 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 EXOC3L1Q86VI1 746 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 DOCK3Q8IZD9 2030 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 BEST2Q8NFU1 509 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 DNAJB3Q8WWF6 145 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 PEBP4Q96S96 227 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 CNPY3Q9BT09 278 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 RNF19AQ9NV58 838 aa26.87■■□□□ 1.89
SMARCD3-203ENST00000392811 C2CD4BA6NLJ0 364 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 TCEA3O75764 348 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 RECQL4O94761 1208 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 IFNB1P01574 187 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 PCK1P35558 622 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 RGS7P49802 495 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 ALKAL1Q6UXT8 129 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 CEP128Q6ZU80 1094 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 TAOK1Q7L7X3 1001 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 TTC13Q8NBP0 860 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 ATXN2LQ8WWM7 1075 aaKnown RBP26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 RXFP2Q8WXD0 754 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 FRMD8P1Q9BZ68 369 aaPredicted RBP26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 MIS12Q9H081 205 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 CTNNAL1Q9UBT7 734 aa26.86■■□□□ 1.89
SMARCD3-203ENST00000392811 TRIM66O15016 1216 aa26.85■■□□□ 1.89
SMARCD3-203ENST00000392811 PCBP1Q15365 356 aaKnown RBP eCLIP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms