RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 WDCPQ9H6R7 721 aa17.25■□□□□ 0.35
SNX9-201ENST00000392185 A0A0B4J269 797 aa17.25■□□□□ 0.35
SNX9-201ENST00000392185 CCDC195A0A1B0GUA6 201 aa17.25■□□□□ 0.35
SNX9-201ENST00000392185 OPLAHO14841 1288 aa17.25■□□□□ 0.35
SNX9-201ENST00000392185 PSTPIP1O43586 416 aa17.25■□□□□ 0.35
SNX9-201ENST00000392185 PRAMEP78395 509 aa17.25■□□□□ 0.35
SNX9-201ENST00000392185 PCSK7Q16549 785 aa17.25■□□□□ 0.35
SNX9-201ENST00000392185 ELMOD1Q8N336 334 aa17.25■□□□□ 0.35
SNX9-201ENST00000392185 LPPQ93052 612 aa17.25■□□□□ 0.35
SNX9-201ENST00000392185 SLITRK1Q96PX8 696 aa17.25■□□□□ 0.35
SNX9-201ENST00000392185 E5RJQ4 531 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 MX2P20592 715 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 OVOS1Q6IE37 1185 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 DENND1BQ6P3S1 775 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 MFSD7Q6UXD7 560 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 SYDE1Q6ZW31 735 aaPredicted RBP17.24■□□□□ 0.35
SNX9-201ENST00000392185 RNF135Q8IUD6 432 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 ARHGAP24Q8N264 748 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 KREMEN1Q96MU8 473 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 DHX33Q9H6R0 707 aaKnown RBP17.24■□□□□ 0.35
SNX9-201ENST00000392185 TYK2P29597 1187 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 HSD17B3P37058 310 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 RECQLP46063 649 aaPredicted RBP17.24■□□□□ 0.35
SNX9-201ENST00000392185 RTP1P59025 263 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 ADIGQ0VDE8 80 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 CTXN3Q4LDR2 81 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 KLHL29Q96CT2 875 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 TSR3Q9UJK0 312 aaKnown RBP17.24■□□□□ 0.35
SNX9-201ENST00000392185 MYH13Q9UKX3 1938 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 SKIP12755 728 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 CCDC130P13994 396 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 FNTAP49354 379 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 ATPAF2Q8N5M1 289 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 BRI3BPQ8WY22 251 aa17.24■□□□□ 0.35
SNX9-201ENST00000392185 RRP15Q9Y3B9 282 aaKnown RBP17.24■□□□□ 0.35
SNX9-201ENST00000392185 CRYBG1Q9Y4K1 1723 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 ZBTB24O43167 697 aaPredicted RBP17.23■□□□□ 0.35
SNX9-201ENST00000392185 DNAJB2P25686 324 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 MARCKSL1P49006 195 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 FMO1Q01740 532 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 STAT4Q14765 748 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 NFIL3Q16649 462 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 SPOCD1Q6ZMY3 1216 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 LRRC15Q8TF66 581 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 CYTH2Q99418 400 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 SARS2Q9NP81 518 aaKnown RBP17.23■□□□□ 0.35
SNX9-201ENST00000392185 TRPV2Q9Y5S1 764 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 MYH14Q7Z406 1995 aaKnown RBP17.23■□□□□ 0.35
SNX9-201ENST00000392185 ZNF263O14978 683 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 CDH16O75309 829 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 GMNNO75496 209 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 KCNA3P22001 575 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 BFSP2Q13515 415 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 ATP13A4Q4VNC1 1196 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 TAF1BQ53T94 588 aaPredicted RBP17.23■□□□□ 0.35
SNX9-201ENST00000392185 RNF219Q5W0B1 726 aaPredicted RBP17.23■□□□□ 0.35
SNX9-201ENST00000392185 TRIM42Q8IWZ5 723 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 APBA2Q99767 749 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 NUDT5Q9UKK9 219 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 PKD1L3Q7Z443 1732 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 NUP188Q5SRE5 1749 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 NOL4O94818 638 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 KITP10721 976 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 CTCFP49711 727 aaPredicted RBP17.23■□□□□ 0.35
SNX9-201ENST00000392185 CENPCQ03188 943 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 BST2Q10589 180 aaKnown RBP17.23■□□□□ 0.35
SNX9-201ENST00000392185 NOGQ13253 232 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 WDR93Q6P2C0 686 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 UBE2Q2Q8WVN8 375 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNX9-201ENST00000392185 COLEC11Q9BWP8 271 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 NXF3Q9H4D5 531 aaKnown RBP17.23■□□□□ 0.35
SNX9-201ENST00000392185 PAK5Q9P286 719 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 ARHGAP28Q9P2N2 729 aa17.23■□□□□ 0.35
SNX9-201ENST00000392185 E2F8A0AVK6 867 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 GMNCA6NCL1 334 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 C3orf70A6NLC5 250 aaPredicted RBP17.22■□□□□ 0.35
SNX9-201ENST00000392185 CST3P01034 146 aaPredicted RBP17.22■□□□□ 0.35
SNX9-201ENST00000392185 RARAP10276 462 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 SP2Q02086 613 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 MAPRE1Q15691 268 aaKnown RBP17.22■□□□□ 0.35
SNX9-201ENST00000392185 C11orf63Q6NUN7 778 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 SENP8Q96LD8 212 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 TRABDQ9H4I3 376 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 VIPAS39Q9H9C1 493 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 AP4E1Q9UPM8 1137 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 PCDHGC5Q9Y5F6 944 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 HNRNPH3P31942 346 aaKnown RBP17.22■□□□□ 0.35
SNX9-201ENST00000392185 ETFBP38117 255 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 FSTL1Q12841 308 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 BIRC2Q13490 618 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 CCNYL1Q8N7R7 359 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 CFAP61Q8NHU2 1237 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.22■□□□□ 0.354e-7■■■■■ 58.1
SNX9-201ENST00000392185 DHX15O43143 795 aaKnown RBP17.22■□□□□ 0.35
SNX9-201ENST00000392185 PDK1Q15118 436 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 WSCD1Q658N2 575 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 IL31Q6EBC2 164 aa17.22■□□□□ 0.35
SNX9-201ENST00000392185 TRMT10CQ7L0Y3 403 aaKnown RBP17.22■□□□□ 0.35
SNX9-201ENST00000392185 C12orf29Q8N999 325 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms