RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 MAPK4P31152 587 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MAT2AP31153 395 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HOXD3P31249 432 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HOXA11P31270 313 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HOXC8P31273 242 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 UQCRC1P31930 480 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HIBADHP31937 336 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 L1CAMP32004 1257 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GKP32189 559 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CXCR5P32302 372 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ICAM3P32942 547 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TNFSF8P32971 234 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CSTF2P33240 577 aaKnown RBP eCLIP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LSP1P33241 339 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TTKP33981 857 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MCM4P33991 863 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MCM7P33993 719 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SHMT1P34896 483 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RYKP34925 604 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SPRR2BP35325 72 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SPRR2AP35326 72 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MSX2P35548 267 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DDIT3P35638 169 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SOX5P35711 763 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PDE6BP35913 854 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FLT3P36888 993 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GNL1P36915 607 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 COILP38432 576 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ITGAEP38570 1179 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 EIF4A3P38919 411 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CDKN1AP38936 164 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS19P39019 145 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GRIK1P39086 918 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ADCY8P40145 1251 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IL6STP40189 918 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 THPOP40225 353 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PBX1P40424 430 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PMELP40967 661 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ETV5P41161 510 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ETV3P41162 512 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CASRP41180 1078 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RGS2P41220 211 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 WNT5AP41221 380 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 UBA7P41226 1012 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 APOBEC1P41238 236 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FOLR3P41439 243 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ADCYAP1R1P41586 468 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 STAT6P42226 847 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GRIA3P42263 894 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PIK3CBP42338 1070 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CDKN2AP42771 156 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MCAMP43121 646 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ETV4P43268 484 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TNFRSF4P43489 277 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 KIR3DL1P43629 444 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 KIR3DL2P43630 455 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ABCG1P45844 678 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 USP5P45974 858 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MAPK8P45983 427 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NOP2P46087 812 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RPL21P46778 160 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ID4P47928 161 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZFP36L2P47974 494 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC6A8P48029 635 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MTNR1AP48039 350 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ME1P48163 572 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GLRBP48167 497 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TM4SF4P48230 202 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LEPRP48357 1165 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RFX2P48378 723 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ARCN1P48444 511 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PPP3CCP48454 512 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GCLCP48506 637 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NRIP1P48552 1158 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PSMD8P48556 350 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MASP1P48740 699 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LHX1P48742 406 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NOVP48745 357 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC11A2P49281 568 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NASPP49321 788 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FNTBP49356 437 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GLUD2P49448 558 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CARSP49589 748 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HOXA1P49639 335 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MAN2A2P49641 1150 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 STARP49675 285 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GPR15P49685 360 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RBM25P49756 843 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CLK1P49759 484 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PGFP49763 221 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RGS19P49795 217 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GSK3BP49841 420 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DIO1P49895 249 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SELENOPP49908 381 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CDKN1CP49918 316 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MRE11P49959 708 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 AGTR2P50052 363 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MEOX2P50222 304 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MMP14P50281 582 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HTR6P50406 440 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms