RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 ROPN1Q9HAT0 212 aaPredicted RBP12.7□□□□□ -0.38
CAPRIN1-202ENST00000389645 AKT3Q9Y243 479 aa12.7□□□□□ -0.38
CAPRIN1-202ENST00000389645 USP15Q9Y4E8 981 aaPredicted RBP12.7□□□□□ -0.38
CAPRIN1-202ENST00000389645 A0A0B4J269 797 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 MSCO60682 206 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 RFC1P35251 1148 aaPredicted RBP12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 IL9RQ01113 521 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 C6orf89Q6UWU4 347 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 TMEM174Q8WUU8 243 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 SPOCK2Q92563 424 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 NIF3L1Q9GZT8 377 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 VTA1Q9NP79 307 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 PSTPIP1O43586 416 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 HBP1O60381 514 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 TOM1L1O75674 476 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 RNF8O76064 485 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 HADHQ16836 314 aaKnown RBP12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 EMC10Q5UCC4 262 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 SPATA21Q7Z572 469 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 EXD1Q8NHP7 514 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 ACTL9Q8TC94 416 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 ZNF483Q8TF39 744 aaPredicted RBP12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 ZNF317Q96PQ6 595 aaPredicted RBP12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 ECT2Q9H8V3 914 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 PLXNA1Q9UIW2 1896 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 PLXNB2O15031 1838 aa12.69□□□□□ -0.38
CAPRIN1-202ENST00000389645 H3BRB1 525 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 CYP1A1P04798 512 aaPredicted RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 EZRP15311 586 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 ACO1P21399 889 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 SSTR1P30872 391 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 RGS7P49802 495 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 LMNB2Q03252 620 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 TMEM62Q0P6H9 643 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 MPP2Q14168 576 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 OR6B2Q6IFH4 312 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 SPOCD1Q6ZMY3 1216 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 YTHDF3Q7Z739 585 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 RCOR2Q8IZ40 523 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 C16orf70Q9BSU1 422 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 TRABDQ9H4I3 376 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 TUT1Q9H6E5 874 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 RPF1Q9H9Y2 349 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 NGRNQ9NPE2 291 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 METTL5Q9NRN9 209 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 DCTN4Q9UJW0 460 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 HEY1Q9Y5J3 304 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 IGKV6-21A0A0C4DH24 114 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 H7C0C1 242 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 M0QYV0 167 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 CHUKO15111 745 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 POLR2BP30876 1174 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 ATP5OP48047 213 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 YWHAGP61981 247 aaKnown RBP eCLIP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 OTUD4Q01804 1114 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 CAV1Q03135 178 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 FAM102AQ5T9C2 384 aaPredicted RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 EEF1DP3Q658K8 133 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 CENPUQ71F23 418 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 LRRC8CQ8TDW0 803 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 TFAP2BQ92481 460 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 CCT6BQ92526 530 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 TRIM33Q9UPN9 1127 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 C22orf31O95567 290 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 SETDB1Q15047 1291 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 PKN2Q16513 984 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 DENND1BQ6P3S1 775 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 FAM71DQ8N9W8 422 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 OR6J1Q8NGC5 347 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 C12orf65Q9H3J6 166 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 SLCO1B3Q9NPD5 702 aa12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 TPX2Q9ULW0 747 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-202ENST00000389645 A0A087WZ62 844 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 SNX3O60493 162 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 ITGB3P05106 788 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 PAEPP09466 180 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 OGDHQ02218 1023 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 GAD2Q05329 585 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 MXD4Q14582 209 aaPredicted RBP12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 SGSM1Q2NKQ1 1148 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 PPP6R3Q5H9R7 873 aaPredicted RBP12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 THEMIS2Q5TEJ8 643 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 FAXCQ5TGI0 409 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 C1orf228Q6PIY5 440 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 TMEM192Q8IY95 271 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 C7orf31Q8N865 590 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 PPTC7Q8NI37 304 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 JOSD2Q8TAC2 188 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 SLITRK1Q96PX8 696 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 FDXACB1Q9BRP7 624 aaPredicted RBP12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 APOL6Q9BWW8 343 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 ABHD16BQ9H3Z7 469 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 STYXL1Q9Y6J8 313 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 OGTO15294 1046 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 PMM2O15305 246 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 MMP8P22894 467 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 USP4Q13107 963 aa12.67□□□□□ -0.38
CAPRIN1-202ENST00000389645 STAT4Q14765 748 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms