RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 ACBD6Q9BR61 282 aa22.97■■□□□ 1.27
CNEP1R1-201ENST00000389134 REEP2Q9BRK0 252 aa22.97■■□□□ 1.27
CNEP1R1-201ENST00000389134 LINC00597Q9H2U6 94 aa22.97■■□□□ 1.27
CNEP1R1-201ENST00000389134 PARVGQ9HBI0 331 aa22.97■■□□□ 1.27
CNEP1R1-201ENST00000389134 GCNT4Q9P109 453 aa22.97■■□□□ 1.27
CNEP1R1-201ENST00000389134 UPK3BL1B0FP48 263 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 UPK3BL2E5RIL1 263 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 MAP3K13O43283 966 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 TRAK2O60296 914 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 FAM13AO94988 1023 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 CYP2F1P24903 491 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 RDXP35241 583 aaKnown RBP22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 OPRD1P41143 372 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 PNPLA4P41247 253 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 ZNF131P52739 623 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 MRPS21P82921 87 aaKnown RBP22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 TMEM119Q4V9L6 283 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 SPDYCQ5MJ68 293 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 LMBRD2Q68DH5 695 aaPredicted RBP22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 ADALQ6DHV7 355 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 SYT12Q8IV01 421 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 CCDC33Q8N5R6 958 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 ARL14EPQ8N8R7 260 aaPredicted RBP22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 SPACA7Q96KW9 195 aa22.96■■□□□ 1.27
CNEP1R1-201ENST00000389134 H0Y626 953 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 TRIM16O95361 564 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 ENGP17813 658 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 HDCP19113 662 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 P2RY2P41231 377 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 MAPK8P45983 427 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 PDE6CP51160 858 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 ATP2C1P98194 919 aaPredicted RBP22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 GTF2BQ00403 316 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 KCNB1Q14721 858 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 SLC23A3Q6PIS1 610 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 PIP4P1Q86T03 277 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 TTC30AQ86WT1 665 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 NT5DC4Q86YG4 428 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 PDCL2Q8N4E4 241 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 KLK13Q9UKR3 277 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 AGO2Q9UKV8 859 aaKnown RBP22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 ARHGAP26Q9UNA1 814 aa22.95■■□□□ 1.26
CNEP1R1-201ENST00000389134 SIM1P81133 766 aaPredicted RBP22.94■■□□□ 1.26
CNEP1R1-201ENST00000389134 MYL7Q01449 175 aa22.94■■□□□ 1.26
CNEP1R1-201ENST00000389134 BYSLQ13895 437 aaKnown RBP22.94■■□□□ 1.26
CNEP1R1-201ENST00000389134 INTS6LQ5JSJ4 861 aaKnown RBP22.94■■□□□ 1.26
CNEP1R1-201ENST00000389134 TMEM92Q6UXU6 159 aa22.94■■□□□ 1.26
CNEP1R1-201ENST00000389134 GPBP1Q86WP2 473 aa22.94■■□□□ 1.26
CNEP1R1-201ENST00000389134 WHAMMQ8TF30 809 aa22.94■■□□□ 1.26
CNEP1R1-201ENST00000389134 FNBP1Q96RU3 617 aa22.94■■□□□ 1.26
CNEP1R1-201ENST00000389134 DDX43Q9NXZ2 648 aaKnown RBP22.94■■□□□ 1.26
CNEP1R1-201ENST00000389134 STYXL1Q9Y6J8 313 aa22.94■■□□□ 1.26
CNEP1R1-201ENST00000389134 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 SPAARA0A1B0GVQ0 90 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 VWA3AA6NCI4 1184 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 C2orf78A6NCI8 922 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 ANKRD63C9JTQ0 380 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 SLC26A4O43511 780 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 IL18RAPO95256 599 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 PFKLP17858 780 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 SEMA3BQ13214 749 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 CFAP221Q4G0U5 840 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 HSF5Q4G112 596 aaPredicted RBP22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 ZC2HC1CQ53FD0 456 aaPredicted RBP22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 TMEFF1Q8IYR6 380 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 TMEM86AQ8N2M4 240 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 LRRC15Q8TF66 581 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 RLN3Q8WXF3 142 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 POLMQ9NP87 494 aaPredicted RBP22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 TMEM74BQ9NUR3 256 aa22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 CIZ1Q9ULV3 898 aaPredicted RBP22.93■■□□□ 1.26
CNEP1R1-201ENST00000389134 FAM221BA6H8Z2 402 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 MYMKA6NI61 221 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 TAF4O00268 1085 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 HUS1O60921 280 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 HOXD12P35452 270 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 RILPL1Q5EBL4 403 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 HDDC3Q8N4P3 179 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 KIAA1958Q8N8K9 716 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 FUBP3Q96I24 572 aaKnown RBP eCLIP22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 ZSCAN31Q96LW9 406 aaPredicted RBP22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 FIZ1Q96SL8 496 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 PKMYT1Q99640 499 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 GTF3C4Q9UKN8 822 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 L1RE1Q9UN81 338 aa22.92■■□□□ 1.26
CNEP1R1-201ENST00000389134 IGSF10Q6WRI0 2623 aa22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 LOC400499M0QZD8 3231 aa22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 HNRNPLP14866 589 aaKnown RBP eCLIP22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 PTGER3P43115 390 aa22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 ATXN3P54252 364 aaPredicted RBP22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 GAB4Q2WGN9 574 aa22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 LYSMD4Q5XG99 296 aa22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 ARL6IP4Q66PJ3 421 aaKnown RBP22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 ARMCX6Q7L4S7 300 aa22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 SPATA2LQ8IUW3 424 aaPredicted RBP22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 TXNDC5Q8NBS9 432 aaKnown RBP22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 SPATA18Q8TC71 538 aa22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 ZHX3Q9H4I2 956 aa22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 BCCIPQ9P287 314 aaKnown RBP eCLIP22.91■■□□□ 1.26
CNEP1R1-201ENST00000389134 PILRBQ9UKJ0 227 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms