RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 WASHC2AQ641Q2 1341 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 EME2A4GXA9 379 aaPredicted RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 CCDC154A6NI56 674 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 PRSS29PA6NIE9 313 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 LACTBL1A8MY62 500 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 hCG_1984214I3L0E3 225 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 M0QYG6 137 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 F2RL2O00254 374 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 GRID2O43424 1007 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 KRT86O43790 486 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 SLC28A2O43868 658 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 BRINP1O60477 761 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 TLR2O60603 784 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 NDUFS2O75306 463 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 TULP3O75386 442 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 RNF8O76064 485 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 PRKD3O94806 890 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 CAMTA2O94983 1202 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 CHEK2O96017 543 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 IGKV3-20P01619 116 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 A1BGP04217 495 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 GNAI2P04899 355 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 RPLP2P05387 115 aaKnown RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 DLDP09622 509 aaKnown RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 RARBP10826 455 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 TNFRSF1BP20333 461 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 MALP21145 153 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 TNFRSF8P28908 595 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 CYP2C19P33261 490 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 WASP42768 502 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 PXNP49023 591 aaPredicted RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 RENBPP51606 427 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 COPB1P53618 953 aaKnown RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 SLC16A1P53985 500 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 TPTEP56180 551 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 LILRA4P59901 499 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 KRTAP10-5P60370 271 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 ZXDBP98169 803 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 E2F1Q01094 437 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 TLE1Q04724 770 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 STIM1Q13586 685 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 E2F2Q14209 437 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 KRT81Q14533 505 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 STAT4Q14765 748 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 ACAP2Q15057 778 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 ASIC2Q16515 512 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 LY6KQ17RY6 165 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 C3orf36Q3SXR2 165 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 AWAT1Q58HT5 328 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 RNASE12Q5GAN4 147 aaKnown RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 MANEAQ5SRI9 462 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 DEPDC1Q5TB30 811 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 ARHGAP40Q5TG30 622 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 GFI1BQ5VTD9 330 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 SFRP4Q6FHJ7 346 aaPredicted RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 CAPRIN2Q6IMN6 1127 aaKnown RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 PPP4R3AQ6IN85 833 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 RGS7BPQ6MZT1 257 aaPredicted RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 PGM2L1Q6PCE3 622 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 SLC4A10Q6U841 1118 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 RANBP10Q6VN20 620 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 FOXP4Q8IVH2 680 aaPredicted RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 C16orf71Q8IYS4 520 aaPredicted RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 PELI3Q8N2H9 469 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 ARFGAP1Q8N6T3 406 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 PCSK9Q8NBP7 692 aaKnown RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 FAM46DQ8NEK8 389 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 B4GALNT2Q8NHY0 566 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 TMEM255BQ8WV15 326 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 ASB5Q8WWX0 329 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 ATG4AQ8WYN0 398 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 NR4A3Q92570 626 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 MAP4K1Q92918 833 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 KAT5Q92993 513 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 SLC25A28Q96A46 364 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 WBP1Q96G27 269 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 SLC46A1Q96NT5 459 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 PUS7Q96PZ0 661 aaKnown RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 FYTTD1Q96QD9 318 aaKnown RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 SNX18Q96RF0 628 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 DMRTA2Q96SC8 542 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 PTDSS2Q9BVG9 487 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 C1orf43Q9BWL3 253 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 PIF1Q9H611 641 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 MRPL44Q9H9J2 332 aaKnown RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 GPR35Q9HC97 309 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 SIDT1Q9NXL6 827 aaKnown RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 CALCOCO1Q9P1Z2 691 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 NIPSNAP3AQ9UFN0 247 aaPredicted RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 ERRFI1Q9UJM3 462 aaPredicted RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 SH2B3Q9UQQ2 575 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 MRPS17Q9Y2R5 130 aaKnown RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 PCDHA3Q9Y5H8 950 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 NOTCH3Q9UM47 2321 aa0.76□□□□□ -2.29
SNORD28-201ENST00000384706 TRIP12Q14669 1992 aaPredicted RBP0.76□□□□□ -2.29
SNORD28-201ENST00000384706 IGLV5-39A0A0G2JS06 123 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 LRRC14BA6NHZ5 514 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 PRSS47A8MTI9 375 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 NT5C1B-RDH14C9J2C7 533 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 BTBD19C9JJ37 291 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms