RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 HDCP19113 662 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CDK11BP21127 795 aaKnown RBP3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 TKTP29401 623 aaKnown RBP3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CCKBRP32239 447 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SOX8P57073 446 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 GPSM2P81274 684 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 EMC10Q5UCC4 262 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 USP45Q70EL2 814 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 GALNT4Q8N4A0 578 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PRR18Q8N4B5 295 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 NANOGP1Q8N7R0 232 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 NRACQ8N912 160 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ABHD11Q8NFV4 315 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PRSS3P2Q8NHM4 247 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 BRIX1Q8TDN6 353 aaKnown RBP3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 LENG8Q96PV6 779 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 TMEM79Q9BSE2 394 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 GABRQQ9UN88 632 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CACNA1IQ9P0X4 2223 aa3.29□□□□□ -1.88
RNU6-1040P-201ENST00000383974 hCG_1984214I3L0E3 225 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CSF1RP07333 972 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 GRPP07492 148 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CBSLP0DN79 551 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SNHG28P0DPA3 235 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ATP5F1P24539 256 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CBSP35520 551 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 RENBPP51606 427 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 LINC00205P59089 165 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 E2F2Q14209 437 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PLS1Q14651 629 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 L1TD1Q5T7N2 865 aaKnown RBP3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 DEPDC1Q5TB30 811 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SHC4Q6S5L8 630 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CATIPQ7Z7H3 387 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SAMD14Q8IZD0 417 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CELF5Q8N6W0 485 aaKnown RBP3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 TERB1Q8NA31 727 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PIGOQ8TEQ8 1089 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SOCS4Q8WXH5 440 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SLC35A4Q96G79 324 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 FAM167AQ96KS9 214 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SNX18Q96RF0 628 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SMAD5Q99717 465 aaKnown RBP3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 THAP7Q9BT49 309 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 ADGRE3Q9BY15 652 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CIPCQ9C0C6 399 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 EBF3Q9H4W6 596 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 PNPOQ9NVS9 261 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 MTMR4Q9NYA4 1195 aa3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 SCAF8Q9UPN6 1271 aaKnown RBP3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 MRPS17Q9Y2R5 130 aaKnown RBP3.28□□□□□ -1.88
RNU6-1040P-201ENST00000383974 CNTNAP2Q9UHC6 1331 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 H3BNC9 293 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 H3BUI4 141 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ADAM10O14672 748 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 FGBP02675 491 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 CHRM5P08912 532 aaPredicted RBP3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 CCND1P24385 295 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 FPR3P25089 353 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 IL1R2P27930 398 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 VIPR2P41587 438 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ALDH5A1P51649 535 aaPredicted RBP3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ZNF268Q14587 947 aaPredicted RBP3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 CYP1B1Q16678 543 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 CCDC157Q569K6 752 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 RNASE12Q5GAN4 147 aaKnown RBP3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 SERPINA13PQ6UXR4 307 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 IRF2BP2Q7Z5L9 587 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PRPF38AQ8NAV1 312 aaKnown RBP3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 FAM118BQ9BPY3 351 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 CXorf36Q9H7Y0 433 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PCDHA6Q9UN73 950 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 SHOC2Q9UQ13 582 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PLEKHM1Q9Y4G2 1056 aa3.27□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MYMKA6NI61 221 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 UBE2Q2LH0YL09 131 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 FCHO1O14526 889 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 VNN1O95497 513 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 DLDP09622 509 aaKnown RBP3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ADORA2AP29274 412 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 RECQLP46063 649 aaPredicted RBP3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 KCNJ5P48544 419 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PDE6CP51160 858 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 EVA1CP58658 441 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 NKX6-1P78426 367 aaPredicted RBP3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 E2F1Q01094 437 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MYO1EQ12965 1108 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 PGS1Q32NB8 556 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 TBC1D25Q3MII6 688 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ZIK1Q3SY52 487 aaPredicted RBP3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 AMOTQ4VCS5 1084 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MTHFD1LQ6UB35 978 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 DPY19L3Q6ZPD9 716 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 MRPL10Q7Z7H8 261 aaKnown RBP3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ZNF280BQ86YH2 543 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 ZDHHC17Q8IUH5 632 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 SLC15A3Q8IY34 581 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 OSCP1Q8WVF1 389 aa3.26□□□□□ -1.89
RNU6-1040P-201ENST00000383974 COQ8BQ96D53 544 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms