RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 KIAA1468Q9P260 1216 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 HMGXB4Q9UGU5 601 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 CTNND2Q9UQB3 1225 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 ASB3Q9Y575 518 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 KIAA1549LQ6ZVL6 1849 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 FAM163BP0C2L3 166 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 GNL1P36915 607 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 CACNA2D1P54289 1103 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 NOP14P78316 857 aaKnown RBP12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 FKBP3Q00688 224 aaKnown RBP12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 CAMK2BQ13554 666 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 DDR2Q16832 855 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 CBWD6Q4V339 395 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 MDH1BQ5I0G3 518 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 CBWD3Q5JTY5 395 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 FAM78AQ5JUQ0 283 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 CBWD5Q5RIA9 395 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 CYP4A22Q5TCH4 519 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 KLHL10Q6JEL2 608 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 FOXR2Q6PJQ5 311 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 MTSS1LQ765P7 747 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 ERMP1Q7Z2K6 904 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 SIX5Q8N196 739 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 DTWD2Q8NBA8 298 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 OR6B3Q8NGW1 331 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 NELFBQ8WX92 580 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 TAF4BQ92750 862 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 SEMA4DQ92854 862 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 NXPE3Q969Y0 559 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 FUBP3Q96I24 572 aaKnown RBP eCLIP12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 ASB16Q96NS5 453 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 BCO2Q9BYV7 579 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 PLA2G2FQ9BZM2 168 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 SNX25Q9H3E2 840 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 CLSTN2Q9H4D0 955 aa12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 EP300Q09472 2414 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3F-202ENST00000381565 KRBA1A5PL33 1030 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 A8MXQ7 604 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 ZNF197O14709 1029 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 TADA3O75528 432 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 SRFP11831 508 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 GABRR2P28476 465 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 GTF2H1P32780 548 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 PPP1R2P41236 205 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 MAGEA11P43364 429 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 ID4P47928 161 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 MXI1P50539 228 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 CYP4F8P98187 520 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 STIM1Q13586 685 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 VEPH1Q14D04 833 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 SGSM1Q2NKQ1 1148 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 DCAF17Q5H9S7 520 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 PPP1R15BQ5SWA1 713 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 KRT39Q6A163 491 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 TANGO2Q6ICL3 276 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 ITIH5Q86UX2 942 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 SPATA2LQ8IUW3 424 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 TRIML1Q8N9V2 468 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 B3GALNT2Q8NCR0 500 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 MYCBPAPQ8TBZ2 947 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 FAM200AQ8TCP9 573 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 SLC35C1Q96A29 364 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 RSPRY1Q96DX4 576 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 MED15Q96RN5 788 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 F5P12259 2224 aa12.31□□□□□ -0.44
APOBEC3F-202ENST00000381565 ECI2O75521 394 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 NOL4O94818 638 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 CLSTN1O94985 981 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 CFHP08603 1231 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 PTPN1P18031 435 aaKnown RBP12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 BDNFP23560 247 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 STX17P56962 302 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 CYP27A1Q02318 531 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 INCA1Q0VD86 236 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 PAK1Q13153 545 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 ORC1Q13415 861 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 C4orf50Q6ZRC1 276 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 ZSCAN18Q8TBC5 510 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 GPT2Q8TD30 523 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 SMARCD2Q92925 531 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 ELSPBP1Q96BH3 223 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 TRMT2BQ96GJ1 504 aaKnown RBP12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 CEP63Q96MT8 703 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 TWNKQ96RR1 684 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 B3GNT5Q9BYG0 378 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 ZNF518BQ9C0D4 1074 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 NIF3L1Q9GZT8 377 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 TRPV4Q9HBA0 871 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 SLC2A4RGQ9NR83 387 aa12.3□□□□□ -0.44
APOBEC3F-202ENST00000381565 FANCMQ8IYD8 2048 aa12.29□□□□□ -0.44
APOBEC3F-202ENST00000381565 SLC38A8A6NNN8 435 aa12.29□□□□□ -0.44
APOBEC3F-202ENST00000381565 CLDN5O00501 218 aa12.29□□□□□ -0.44
APOBEC3F-202ENST00000381565 PRAMEF12O95522 483 aa12.29□□□□□ -0.44
APOBEC3F-202ENST00000381565 F11P03951 625 aa12.29□□□□□ -0.44
APOBEC3F-202ENST00000381565 NDST1P52848 882 aa12.29□□□□□ -0.44
APOBEC3F-202ENST00000381565 NLRP12P59046 1061 aa12.29□□□□□ -0.44
APOBEC3F-202ENST00000381565 RPL10AP62906 217 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms