RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 MAP3K20Q9NYL2 800 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 GPRC5DQ9NZD1 345 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 PCDHA6Q9UN73 950 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 SATB2Q9UPW6 733 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 PCDHA8Q9Y5H6 950 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 PCM1Q15154 2024 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 PVALEFA0A1B0GWK0 134 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 A8MU76 341 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ICMTO60725 284 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 SPAG7O75391 227 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 CRYZL1O95825 349 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 FGGP02679 453 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 OR52Z1P0C646 297 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 BAG6P46379 1132 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 RPL21P46778 160 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ADCY7P51828 1080 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 DRG2P55039 364 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 TSPY1Q01534 308 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 IFITM2Q01629 132 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 SPCS2Q15005 226 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 PSMD6Q15008 389 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 SLC18A3Q16572 532 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 AGAP9Q5VTM2 703 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 APOBEC3HQ6NTF7 200 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 SRRM1Q8IYB3 904 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 GALNT4Q8N4A0 578 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 CALML6Q8TD86 181 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ACMSDQ8TDX5 336 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 OTUD5Q96G74 571 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ADAMTS6Q9UKP5 1117 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 GRID1Q9ULK0 1009 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ADGRA3Q8IWK6 1321 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 MAGEC1O60732 1142 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 SULT1C4O75897 302 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 KRT75O95678 551 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 CYP2D6P10635 497 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 PMLP29590 882 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 NAPAP54920 295 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 NR1H2P55055 460 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 XIAPP98170 497 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 MYBPC1Q00872 1141 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 CDONQ4KMG0 1287 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 BTBD8Q5XKL5 378 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 EGFLAMQ63HQ2 1017 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 SMYD5Q6GMV2 418 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 CDC42EP5Q6NZY7 148 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 OTOAQ7RTW8 1153 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 KSR1Q8IVT5 923 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 SLC25A41Q8N5S1 370 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 LSMEM1Q8N8F7 131 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 OSCP1Q8WVF1 389 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 SGF29Q96ES7 293 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 HES6Q96HZ4 224 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 CDK5RAP3Q96JB5 506 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 CLPTM1LQ96KA5 538 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 MKNK1Q9BUB5 465 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ZNF696Q9H7X3 374 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 GPAMQ9HCL2 828 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 NPHS2Q9NP85 383 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 ARHGEF4Q9NR80 690 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 TYW1Q9NV66 732 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 MTRF1LQ9UGC7 380 aaKnown RBP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 IFT52Q9Y366 437 aa7.82□□□□□ -1.16
CDKL5-201ENST00000379989 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDKL5-201ENST00000379989 LTBP3Q9NS15 1303 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 LOXHD1Q8IVV2 1947 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 CYP3A7-CYP3A51PA0A087WV96 503 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 CYP2D7A0A087X1C5 515 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 FAM187AA6NFU0 413 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 RSPH10B2B2RC85 870 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 PRDM1O75626 825 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 RSL1D1O76021 490 aaKnown RBP7.81□□□□□ -1.16
CDKL5-201ENST00000379989 DDHD2O94830 711 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 ACSL3O95573 720 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 RSPH10BP0C881 870 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 CES1P23141 567 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 CYP3A7P24462 503 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 RPS12P25398 132 aaKnown RBP7.81□□□□□ -1.16
CDKL5-201ENST00000379989 ETFBP38117 255 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 SCNN1DP51172 638 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 C21orf59P57076 290 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 NUP107P57740 925 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 ADAM17P78536 824 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 STK4Q13043 487 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 SNAPC2Q13487 334 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 GRIK5Q16478 980 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 EDRF1Q3B7T1 1238 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 ZNF829Q3KNS6 432 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-201ENST00000379989 USP41Q3LFD5 358 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 SLC9C1Q4G0N8 1177 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 CCDC58Q4VC31 144 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 ARSHQ5FYA8 562 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 HERC4Q5GLZ8 1057 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-201ENST00000379989 ANKRD40Q6AI12 368 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 ITPRIPL1Q6GPH6 555 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 C4orf22Q6V702 233 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 RGS9BPQ6ZS82 235 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 MIER3Q7Z3K6 550 aa7.81□□□□□ -1.16
CDKL5-201ENST00000379989 CLVS1Q8IUQ0 354 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-201ENST00000379989 SLFN12Q8IYM2 578 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms