RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 ERBB2P04626 1255 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 ATP1A1P05023 1023 aaKnown RBP12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 PBX3P40426 434 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 NOP2P46087 812 aaKnown RBP12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 PLA2G4AP47712 749 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 PDE4CQ08493 712 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 MAMLD1Q13495 774 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 MDH1BQ5I0G3 518 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 LIN9Q5TKA1 542 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 PAPD7Q5XG87 772 aaKnown RBP12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 PMF1Q6P1K2 205 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 TMEM110Q86TL2 294 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 XYLT1Q86Y38 959 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 MSANTD4Q8NCY6 345 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.67□□□□□ -0.385e-7■□□□□ 10.8
EXOSC9-202ENST00000379663 L2HGDHQ9H9P8 463 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 MRPL47Q9HD33 250 aaKnown RBP12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 PARVAQ9NVD7 372 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 WDR35Q9P2L0 1181 aa12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 CHORDC1Q9UHD1 332 aaPredicted RBP12.67□□□□□ -0.38
EXOSC9-202ENST00000379663 OBSL1O75147 1896 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 CARNS1A5YM72 827 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 ENC1O14682 589 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 XPO1O14980 1071 aaKnown RBP12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 LINC00271P0C7V0 271 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 NPR3P17342 541 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 ADORA2BP29275 332 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 NAP1L1P55209 391 aaKnown RBP12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 VARS2Q5ST30 1063 aaKnown RBP12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 MEI1Q5TIA1 1274 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 CLEC20AQ6ZU45 233 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 FAM35AQ86V20 835 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 SYCE1Q8N0S2 351 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 THEM5Q8N1Q8 247 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 HERVK_113Q902F9 699 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 C18orf8Q96DM3 657 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 MCRS1Q96EZ8 462 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 IGSF21Q96ID5 467 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 VN1R3Q9BXE9 311 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 TLR10Q9BXR5 811 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 DUSP16Q9BY84 665 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 B3GNT5Q9BYG0 378 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 GOLPH3Q9H4A6 298 aa12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 RANBP2P49792 3224 aaKnown RBP12.66□□□□□ -0.38
EXOSC9-202ENST00000379663 DENND4CQ5VZ89 1909 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 NT5C1B-RDH14C9J2C7 533 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 E5RJQ4 531 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 CLDN5O00501 218 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 TBC1D4O60343 1298 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 ALDH7A1P49419 539 aaKnown RBP12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 TSPY1Q01534 308 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 TAP1Q03518 808 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 BTG3Q14201 252 aaPredicted RBP12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 ZNF268Q14587 947 aaPredicted RBP12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 MAPRE1Q15691 268 aaKnown RBP12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 CYP4A22Q5TCH4 519 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 RASIP1Q5U651 963 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 FAM171A1Q5VUB5 890 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 KCNT2Q6UVM3 1135 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 DAAM2Q86T65 1068 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 NT5DC3Q86UY8 548 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 LRRTM3Q86VH5 581 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 SLC39A11Q8N1S5 342 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 IPO4Q8TEX9 1081 aaKnown RBP12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 ABHD8Q96I13 439 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 HSFY1Q96LI6 401 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 TMEM209Q96SK2 561 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 MIS12Q9H081 205 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 ZCWPW1Q9H0M4 648 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 CSNK1G1Q9HCP0 422 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 KRT82Q9NSB4 513 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 TMEM30AQ9NV96 361 aa12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 CXXC1Q9P0U4 656 aaPredicted RBP12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 MRPL42Q9Y6G3 142 aaKnown RBP12.65□□□□□ -0.38
EXOSC9-202ENST00000379663 CHD7Q9P2D1 2997 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 TMEM191CA6NGB0 347 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 BEST1O76090 585 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 FTCDO95954 541 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 PRLRP16471 622 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 SYN1P17600 705 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 LAG3P18627 525 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 RTP2Q5QGT7 225 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 ZNF280DQ6N043 979 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 FAM117BQ6P1L5 589 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 DNAJC24Q6P3W2 148 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 ZDHHC17Q8IUH5 632 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 ZMIZ2Q8NF64 920 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 UBE2Q2Q8WVN8 375 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 KCTD13Q8WZ19 329 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 CD101Q93033 1021 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 SMARCD1Q96GM5 515 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 HES6Q96HZ4 224 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 ZNF558Q96NG5 402 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 SLC9A7Q96T83 725 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 YME1L1Q96TA2 773 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 OXCT2Q9BYC2 517 aaPredicted RBP12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 TRIM7Q9C029 511 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 CHST7Q9NS84 486 aa12.64□□□□□ -0.39
EXOSC9-202ENST00000379663 TMLHEQ9NVH6 421 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms