RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CENPXA8MT69 81 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 GFPT1Q06210 699 aaPredicted RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 LPAR1Q92633 364 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 REPS1Q96D71 796 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 ARHGDIBP52566 201 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 TRPM6Q9BX84 2022 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 PLEKHG1Q9ULL1 1385 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 OPLAHO14841 1288 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 ACSL4O60488 711 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 PABPC1P11940 636 aaKnown RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 CCDC126Q96EE4 140 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 H7C1W4 665 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 CYP7B1O75881 506 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 CSNK2BP67870 215 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 IZUMO3Q5VZ72 239 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 SPRP35270 261 aaPredicted RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 GEMIN4P57678 1058 aaKnown RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 RPS6P62753 249 aaKnown RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 USP7Q93009 1102 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 PAK5Q9P286 719 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 POTEMA6NI47 508 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 TRIQKQ629K1 86 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 C4orf22Q6V702 233 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 HDHD2Q9H0R4 259 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 GOLPH3Q9H4A6 298 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 MTA2O94776 668 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 HIST1H2ABP04908 130 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 PDX1P52945 283 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 SLC45A4Q5BKX6 768 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 HIST3H2AQ7L7L0 130 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 HIST1H2ACQ93077 130 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 COLEC11Q9BWP8 271 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 ETNK1Q9HBU6 452 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 HPS5Q9UPZ3 1129 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 PIPSLA2A3N6 862 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 P4HBP07237 508 aaKnown RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 GARTP22102 1010 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 SYCP2LQ5T4T6 812 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 PSMC3IPQ9P2W1 217 aaPredicted RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 TTC33Q6PID6 262 aaPredicted RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 MED8Q96G25 268 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 ORAI2Q96SN7 254 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 KLHL25Q9H0H3 589 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 FAM220BPB1ANY3 271 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 YWHABP31946 246 aaKnown RBP11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 SERPINB8P50452 374 aa11.64□□□□□ -0.55
PTCHD1-201ENST00000379361 B2RBV5 119 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 CCNG1P51959 295 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 SESN2P58004 480 aaPredicted RBP11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 PEX6Q13608 980 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 SFR1Q86XK3 245 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 GLT1D1Q96MS3 346 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 NT5C1AQ9BXI3 368 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 XPO7Q9UIA9 1087 aaKnown RBP11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 RASA1P20936 1047 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 PGS1Q32NB8 556 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 PALB2Q86YC2 1186 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 CDK20Q8IZL9 346 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 UXS1Q8NBZ7 420 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 FAM50BQ9Y247 325 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 CLCN6P51797 869 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 CHRNB3Q05901 458 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 MLXIPLQ9NP71 852 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 USP11P51784 963 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 IPMKQ8NFU5 416 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 CRELD1Q96HD1 420 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 HMG20AQ9NP66 347 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 MGRN1O60291 552 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 CD2BP2O95400 341 aaKnown RBP11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 CHRM3P20309 590 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 PBLDP30039 288 aaPredicted RBP11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 AP1S2P56377 157 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 KBTBD12Q3ZCT8 623 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 VSTM4Q8IW00 320 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 NARS2Q96I59 477 aaKnown RBP11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 RHOBTB1O94844 696 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 NRG3P56975 720 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 SMAD1Q15797 465 aaKnown RBP11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 SPACA7Q96KW9 195 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 KCNS3Q9BQ31 491 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 UBE2OQ9C0C9 1292 aaKnown RBP11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 GPR182O15218 404 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 TRIM25Q14258 630 aaKnown RBP11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 IFNEQ86WN2 208 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 IL1RL2Q9HB29 575 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 TRIM10Q9UDY6 481 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 URODP06132 367 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 ADRA2BP18089 450 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 SENP7Q9BQF6 1050 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 TNNI3P19429 210 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 DDR2Q16832 855 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 MDM1Q8TC05 714 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 PNKPQ96T60 521 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 C17orf102A2RUQ5 167 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 DGAT1O75907 488 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 WARSP23381 471 aaKnown RBP11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 BNC1Q01954 994 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms