RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SERPINC1P01008 464 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 RHOP08100 348 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 VDRP11473 427 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 UCHL3P15374 230 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 RFX1P22670 979 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 GRIK1P39086 918 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 KLK7P49862 253 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 CACNA2D1P54289 1103 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 SYCP1Q15431 976 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 PPP1R26Q5T8A7 1209 aaPredicted RBP19.89■□□□□ 0.77
SSU72-203ENST00000378725 SCN4BQ8IWT1 228 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 RBBP8NLQ8NC74 664 aaPredicted RBP19.89■□□□□ 0.77
SSU72-203ENST00000378725 GIPC2Q8TF65 315 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 SMARCD1Q96GM5 515 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 PHF7Q9BWX1 381 aaPredicted RBP19.89■□□□□ 0.77
SSU72-203ENST00000378725 GANQ9H2C0 597 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 DAAM1Q9Y4D1 1078 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 CLUHO75153 1309 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 HMGA1P17096 107 aaKnown RBP19.88■□□□□ 0.77
SSU72-203ENST00000378725 NTHL1P78549 312 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 VEPH1Q14D04 833 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 ARHGAP44Q17R89 818 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 PABPC1LQ4VXU2 614 aaKnown RBP19.88■□□□□ 0.77
SSU72-203ENST00000378725 SDHAF4Q5VUM1 108 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 TMC8Q8IU68 726 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 HS6ST3Q8IZP7 471 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 LEMD2Q8NC56 503 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 GPR152Q8TDT2 470 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 SMOQ99835 787 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 CORO1BQ9BR76 489 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 STK33Q9BYT3 514 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 GPR88Q9GZN0 384 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 PRKAG3Q9UGI9 489 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 FHOD1Q9Y613 1164 aa19.88■□□□□ 0.77
SSU72-203ENST00000378725 SLC38A8A6NNN8 435 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 F8VP50 259 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 FOXN3O00409 490 aaPredicted RBP19.87■□□□□ 0.77
SSU72-203ENST00000378725 AP1G2O75843 785 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 MICAL2O94851 1124 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 CSH1P0DML2 217 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 CSH2P0DML3 217 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 ADORA2BP29275 332 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 SGO2Q562F6 1265 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 TJAP1Q5JTD0 557 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 PRSS36Q5K4E3 855 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 ZMIZ2Q8NF64 920 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 TFAP2BQ92481 460 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 MYRFLQ96LU7 910 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 KCNK16Q96T55 309 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 ZSWIM1Q9BR11 485 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 DUSP16Q9BY84 665 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 USTQ9Y2C2 406 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 BRWD1Q9NSI6 2320 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 XIRP2A4UGR9 3374 aa19.87■□□□□ 0.77
SSU72-203ENST00000378725 A0A1W2PQC6 194 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 ZNF197O14709 1029 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 EPHB6O15197 1021 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 BEST1O76090 585 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 FAM200BP0CF97 657 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 KRT5P13647 590 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 FSHRP23945 695 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 ANXA13P27216 316 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 UBASH3AP57075 661 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 DRAP1Q14919 205 aaPredicted RBP19.86■□□□□ 0.77
SSU72-203ENST00000378725 CNGA2Q16280 664 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 CYP4A22Q5TCH4 519 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 CLEC20AQ6ZU45 233 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 ADHFE1Q8IWW8 467 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 FAM71AQ8IYT1 594 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 ANKRD52Q8NB46 1076 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 RNF214Q8ND24 703 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 TRMT2BQ96GJ1 504 aaKnown RBP19.86■□□□□ 0.77
SSU72-203ENST00000378725 UBXN6Q9BZV1 441 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 ZNF334Q9HCZ1 680 aaPredicted RBP19.86■□□□□ 0.77
SSU72-203ENST00000378725 DMAP1Q9NPF5 467 aaPredicted RBP19.86■□□□□ 0.77
SSU72-203ENST00000378725 ASAH2Q9NR71 780 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 KRT82Q9NSB4 513 aa19.86■□□□□ 0.77
SSU72-203ENST00000378725 FAM207AQ9NSI2 230 aaPredicted RBP19.86■□□□□ 0.77
SSU72-203ENST00000378725 O00370 1275 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 TNFRSF10BO14763 440 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 MOSPD3O75425 235 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 FGF19O95750 216 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 CD19P15391 556 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 CCR2P41597 374 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 MTMR3Q13615 1198 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 STILQ15468 1287 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 TAF12Q16514 161 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 SLC5A9Q2M3M2 681 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 LCLAT1Q6UWP7 414 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 PDZD4Q76G19 769 aaPredicted RBP19.85■□□□□ 0.77
SSU72-203ENST00000378725 NEK11Q8NG66 645 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 ITFG1Q8TB96 612 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 ANP32EQ9BTT0 268 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 IL21Q9HBE4 155 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.85■□□□□ 0.772e-10■□□□□ 9.6
SSU72-203ENST00000378725 IL37Q9NZH6 218 aa19.85■□□□□ 0.77
SSU72-203ENST00000378725 PRUNE2Q8WUY3 3088 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 C19orf67A6NJJ6 358 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 HHLA1C9JL84 531 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 NPR3P17342 541 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms