RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 TTC39CQ8N584 583 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 UBR7Q8N806 425 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 C2orf15Q8WU43 125 aaKnown RBP12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 TFAP2BQ92481 460 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 FUBP3Q96I24 572 aaKnown RBP eCLIP12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 POMKQ9H5K3 350 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 TTC28Q96AY4 2481 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 DOCK6Q96HP0 2047 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 CYP26A1O43174 497 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 AP1G2O75843 785 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 NOL4O94818 638 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 C1RP00736 705 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 MYL4P12829 197 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 BRD2P25440 801 aaKnown RBP12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 MRPS5P82675 430 aaKnown RBP12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 AAK1Q2M2I8 961 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 DNAJB7Q7Z6W7 309 aaPredicted RBP12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 NEK11Q8NG66 645 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 RPGRIP1Q96KN7 1286 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 ABCB6Q9NP58 842 aa12.44□□□□□ -0.42
DEPDC4-202ENST00000378244 RHOP08100 348 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 SMAD4Q13485 552 aaKnown RBP12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 NR1I3Q14994 352 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 VEPH1Q14D04 833 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 PABPC1LQ4VXU2 614 aaKnown RBP12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 SGO2Q562F6 1265 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 ENOSF1Q7L5Y1 443 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 UBA3Q8TBC4 463 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 UBE2Q2Q8WVN8 375 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 ING5Q8WYH8 240 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 SHC3Q92529 594 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 SMARCD1Q96GM5 515 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 RIPOR3Q96MK2 946 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 ASB2Q96Q27 587 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 ERGIC2Q96RQ1 377 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 ZSWIM1Q9BR11 485 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 XPO4Q9C0E2 1151 aaKnown RBP12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 PTPN2P17706 415 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 ANXA13P27216 316 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 HOXA9P31269 272 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 RPL10AP62906 217 aaKnown RBP12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 ARID5AQ03989 594 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 PLD1Q13393 1074 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 SLC5A9Q2M3M2 681 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 VSTM1Q6UX27 236 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 GET4Q7L5D6 327 aaPredicted RBP12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 CMASQ8NFW8 434 aaPredicted RBP12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 ATXN2LQ8WWM7 1075 aaKnown RBP12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 TCEAL4Q96EI5 215 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 SPAG5Q96R06 1193 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 HNRNPABQ99729 332 aaKnown RBP12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 DNAI2Q9GZS0 605 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 GANQ9H2C0 597 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 PLCB1Q9NQ66 1216 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 TSPAN16Q9UKR8 245 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 MAFFQ9ULX9 164 aa12.43□□□□□ -0.42
DEPDC4-202ENST00000378244 NRG2O14511 850 aaPredicted RBP12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 FAM200BP0CF97 657 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 CCR2P41597 374 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 GOLGA7BQ2TAP0 167 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 CACNA2D4Q7Z3S7 1137 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 SLC47A2Q86VL8 602 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 ITFG1Q8TB96 612 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 PSMG2Q969U7 264 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 SMOQ99835 787 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 GPR88Q9GZN0 384 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 ASAH2Q9NR71 780 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 HSFX1Q9UBD0 423 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 A0A1W2PRU2 124 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 TULP2O00295 520 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 THAP12O43422 761 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 GNA15P30679 374 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 USP46P62068 366 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 SMAD2Q15796 467 aaKnown RBP12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 CYP4A22Q5TCH4 519 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 CLEC20AQ6ZU45 233 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 DENND5BQ6ZUT9 1274 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 PDZD4Q76G19 769 aaPredicted RBP12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 TTC30AQ86WT1 665 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 ZMIZ2Q8NF64 920 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 SCAMP5Q8TAC9 235 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 CPLX3Q8WVH0 158 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 SUSD6Q92537 303 aa12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 NAA15Q9BXJ9 866 aaKnown RBP12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 ZNF334Q9HCZ1 680 aaPredicted RBP12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 WDR6Q9NNW5 1121 aaKnown RBP12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 DMAP1Q9NPF5 467 aaPredicted RBP12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 MRPS23Q9Y3D9 190 aaKnown RBP12.42□□□□□ -0.42
DEPDC4-202ENST00000378244 ATP8B3O60423 1300 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 F8VZ95 297 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 O00370 1275 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 GFPT2O94808 682 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 CFHP08603 1231 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 PAEPP09466 180 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 VDRP11473 427 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 GABRR2P28476 465 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 GBP2P32456 591 aaPredicted RBP12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 CLCN1P35523 988 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 MTHFRP42898 656 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 MAGEA11P43364 429 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms