RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ACO1P21399 889 aaKnown RBP16.93■□□□□ 0.3
RGP1-201ENST00000378078 NAA30Q147X3 362 aaPredicted RBP16.93■□□□□ 0.3
RGP1-201ENST00000378078 CTXN3Q4LDR2 81 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 KCNV1Q6PIU1 500 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 C16orf89Q6UX73 402 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 TFAP2DQ7Z6R9 452 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 MMGT1Q8N4V1 131 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 GLMNQ92990 594 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 TAAR1Q96RJ0 339 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 RBM15Q96T37 977 aaKnown RBP eCLIP16.93■□□□□ 0.3
RGP1-201ENST00000378078 ATP5HO75947 161 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 POLBP06746 335 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 PYGMP11217 842 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 TYW3Q6IPR3 259 aaKnown RBP16.93■□□□□ 0.3
RGP1-201ENST00000378078 C11orf88Q6PI97 169 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 TMC7Q7Z402 723 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 GJD4Q96KN9 370 aaPredicted RBP16.93■□□□□ 0.3
RGP1-201ENST00000378078 IPPQ9Y573 584 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 CNTNAP2Q9UHC6 1331 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 DGKKQ5KSL6 1271 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 CDC42EP5Q6NZY7 148 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 APEX2Q9UBZ4 518 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 PZPP20742 1482 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 STXBP3O00186 592 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 PTAR1Q7Z6K3 402 aaPredicted RBP16.93■□□□□ 0.3
RGP1-201ENST00000378078 CALML6Q8TD86 181 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 SPRTNQ9H040 489 aaPredicted RBP16.93■□□□□ 0.3
RGP1-201ENST00000378078 GID8Q9NWU2 228 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 STOML1Q9UBI4 398 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 DCDC2CA8MYV0 355 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 FAM25AB3EWG3 89 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 FAM25CB3EWG5 89 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 FAM25GB3EWG6 89 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 NR5A2O00482 541 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 CETPP11597 493 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 DPEP1P16444 411 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 SETD3Q86TU7 594 aaPredicted RBP16.92■□□□□ 0.3
RGP1-201ENST00000378078 ENO4A6NNW6 628 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 CYB561D2O14569 222 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 SUPT7LO94864 414 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 VAC14Q08AM6 782 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
RGP1-201ENST00000378078 MACC1Q6ZN28 852 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 WWP1Q9H0M0 922 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 STMN3Q9NZ72 180 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 STAP2Q9UGK3 403 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 TBX3O15119 743 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 MSH4O15457 936 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 NLRP1Q9C000 1473 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 EYA4O95677 639 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 SNAP47Q5SQN1 464 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 EMBQ6PCB8 327 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 SEPT1Q8WYJ6 367 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 ACOX2Q99424 681 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 NT5MQ9NPB1 228 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 ATP6V1B2P21281 511 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 NUP62P37198 522 aaPredicted RBP16.92■□□□□ 0.3
RGP1-201ENST00000378078 LIFRP42702 1097 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 SPATA21Q7Z572 469 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 ATL2Q8NHH9 583 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 TBC1D16Q8TBP0 767 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 USP6NLQ92738 828 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 BTBD9Q96Q07 612 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 TMEM39AQ9NV64 488 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 PLA2G4CQ9UP65 541 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 PTPRTO14522 1441 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 SLC12A8A0AV02 714 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 TRIM43BA6NCK2 446 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 PEX1O43933 1283 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 URODP06132 367 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 SGCGQ13326 291 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 R3HCC1LQ7Z5L2 792 aaKnown RBP16.92■□□□□ 0.3
RGP1-201ENST00000378078 RELTQ969Z4 430 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 TUFT1Q9NNX1 390 aa16.92■□□□□ 0.3
RGP1-201ENST00000378078 USP1O94782 785 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 POP1Q99575 1024 aaKnown RBP16.91■□□□□ 0.3
RGP1-201ENST00000378078 CHP1Q99653 195 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 SENP6Q9GZR1 1112 aaPredicted RBP16.91■□□□□ 0.3
RGP1-201ENST00000378078 EPN3Q9H201 632 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 ERBB4Q15303 1308 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 MGAT4DA6NG13 374 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 CDH2P19022 906 aaPredicted RBP16.91■□□□□ 0.3
RGP1-201ENST00000378078 EPHA7Q15375 998 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 SNRNP27Q8WVK2 155 aaKnown RBP16.91■□□□□ 0.3
RGP1-201ENST00000378078 FAM84BQ96KN1 310 aaPredicted RBP16.91■□□□□ 0.3
RGP1-201ENST00000378078 GRK3P35626 688 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 PTGER2P43116 358 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 BFSP2Q13515 415 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 ZNF786Q8N393 782 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 TUT1Q9H6E5 874 aaKnown RBP16.91■□□□□ 0.3
RGP1-201ENST00000378078 FLT1P17948 1338 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 RGL2O15211 777 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 CCNT2O60583 730 aaKnown RBP16.91■□□□□ 0.3
RGP1-201ENST00000378078 VSNL1P62760 191 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 TRADDQ15628 312 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 BRINP3Q76B58 766 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 CSGALNACT1Q8TDX6 532 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 MRPS31Q92665 395 aaKnown RBP16.91■□□□□ 0.3
RGP1-201ENST00000378078 MTMR12Q9C0I1 747 aa16.91■□□□□ 0.3
RGP1-201ENST00000378078 CDC42BPGQ6DT37 1551 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms