RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 ARNTL2Q8WYA1 636 aa13.7□□□□□ -0.22
CBWD3-203ENST00000377344 SMARCD1Q96GM5 515 aa13.7□□□□□ -0.22
CBWD3-203ENST00000377344 NOX5Q96PH1 765 aa13.7□□□□□ -0.22
CBWD3-203ENST00000377344 CLSTN3Q9BQT9 956 aa13.7□□□□□ -0.22
CBWD3-203ENST00000377344 PACSIN1Q9BY11 444 aa13.7□□□□□ -0.22
CBWD3-203ENST00000377344 DUSP16Q9BY84 665 aa13.7□□□□□ -0.22
CBWD3-203ENST00000377344 SYNCQ9H7C4 482 aa13.7□□□□□ -0.22
CBWD3-203ENST00000377344 TLR9Q9NR96 1032 aa13.7□□□□□ -0.22
CBWD3-203ENST00000377344 TRMT1Q9NXH9 659 aaKnown RBP13.7□□□□□ -0.22
CBWD3-203ENST00000377344 TFR2Q9UP52 801 aa13.7□□□□□ -0.22
CBWD3-203ENST00000377344 SSX2IPQ9Y2D8 614 aa13.7□□□□□ -0.22
CBWD3-203ENST00000377344 PCDHB5Q9Y5E4 795 aa13.7□□□□□ -0.22
CBWD3-203ENST00000377344 TULP2O00295 520 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 GRM6O15303 877 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 ZSCAN12O43309 604 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 LPXNO60711 386 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 H2AFZP0C0S5 128 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 NPR3P17342 541 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 DNAJB1P25685 340 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 RGS7P49802 495 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 ERVFC1P60507 584 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 ROR1Q01973 937 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 CREMQ03060 361 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 GPR17Q13304 367 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 C2CD6Q53TS8 623 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 C10orf76Q5T2E6 689 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 RNF19BQ6ZMZ0 732 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 MMS22LQ6ZRQ5 1243 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 H2AFVQ71UI9 128 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 ERICH1Q86X53 443 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 ATAD1Q8NBU5 361 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 C11orf70Q9BRQ4 267 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 ISCUQ9H1K1 167 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.69□□□□□ -0.22
CBWD3-203ENST00000377344 ADAM22Q9P0K1 906 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 CYTH4Q9UIA0 394 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 NENFQ9UMX5 172 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 WDR27A2RRH5 827 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 PIK3R2O00459 728 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 BEST1O76090 585 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 SETSIPP0DME0 302 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 CYP2F1P24903 491 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 CDH5P33151 784 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-203ENST00000377344 GRIK1P39086 918 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 VAV2P52735 878 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 GALCP54803 685 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 UBE3AQ05086 875 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 PDCLQ13371 301 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 PKDCCQ504Y2 493 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 PPP1R2P3Q6NXS1 205 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 CLEC20AQ6ZU45 233 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 SCN4BQ8IWT1 228 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 C17orf53Q8N3J3 647 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-203ENST00000377344 MSANTD4Q8NCY6 345 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 CTNNBL1Q8WYA6 563 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-203ENST00000377344 TIFAQ96CG3 184 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 KCNK16Q96T55 309 aa13.69□□□□□ -0.22
CBWD3-203ENST00000377344 PDE4DIPQ5VU43 2346 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 MTMR11A4FU01 709 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 H3BNC9 293 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 TEX28O15482 410 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 NDUFV1P49821 464 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 CACNA2D1P54289 1103 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 ADCY1Q08828 1119 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 SMARCB1Q12824 385 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 SMC1AQ14683 1233 aaKnown RBP13.68□□□□□ -0.22
CBWD3-203ENST00000377344 CFAP221Q4G0U5 840 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 PMF1Q6P1K2 205 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 PHLDB2Q86SQ0 1253 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 MCOLN2Q8IZK6 566 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 TXLNBQ8N3L3 684 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 KIAA1524Q8TCG1 905 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 SPPL2BQ8TCT7 592 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 IPO4Q8TEX9 1081 aaKnown RBP13.68□□□□□ -0.22
CBWD3-203ENST00000377344 SLC35F5Q8WV83 523 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 ZNF653Q96CK0 615 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 FUBP3Q96I24 572 aaKnown RBP eCLIP13.68□□□□□ -0.22
CBWD3-203ENST00000377344 PPP1R13BQ96KQ4 1090 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 CPXM1Q96SM3 734 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 SEPT5Q99719 369 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-203ENST00000377344 SMOQ99835 787 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 THAP2Q9H0W7 228 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 LZTFL1Q9NQ48 299 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
CBWD3-203ENST00000377344 FNIP2Q9P278 1114 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 MYO1AQ9UBC5 1043 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 SLC27A5Q9Y2P5 690 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 PCDHGC5Q9Y5F6 944 aa13.68□□□□□ -0.22
CBWD3-203ENST00000377344 A0A0U1RQJ8 604 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 ANKRD62A6NC57 917 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 XPO1O14980 1071 aaKnown RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 ATMINO43313 823 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 CNPP09543 421 aaKnown RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 SMAD3P84022 425 aaKnown RBP13.67□□□□□ -0.22
CBWD3-203ENST00000377344 KIF5AQ12840 1032 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 MGAT5BQ3V5L5 792 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 PTPN20Q4JDL3 420 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 ARHGAP29Q52LW3 1261 aa13.67□□□□□ -0.22
CBWD3-203ENST00000377344 CYP4A22Q5TCH4 519 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms