RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SH2D5Q6ZV89 423 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 NET1Q7Z628 596 aaPredicted RBP17.28■□□□□ 0.36
TRIM39-201ENST00000376656 SESTD1Q86VW0 696 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 SLC25A41Q8N5S1 370 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 MECRQ9BV79 373 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 SPATA16Q9BXB7 569 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 UBE2OQ9C0C9 1292 aaKnown RBP17.28■□□□□ 0.36
TRIM39-201ENST00000376656 TDRD3Q9H7E2 651 aaKnown RBP17.28■□□□□ 0.36
TRIM39-201ENST00000376656 NDE1Q9NXR1 346 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 PPARGC1AQ9UBK2 798 aaKnown RBP17.28■□□□□ 0.36
TRIM39-201ENST00000376656 E7ESA3 106 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 VNN1O95497 513 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 OTUD4Q01804 1114 aaKnown RBP17.28■□□□□ 0.36
TRIM39-201ENST00000376656 CDC16Q13042 620 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 CUL2Q13617 745 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 ULK2Q8IYT8 1036 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 SHKBP1Q8TBC3 707 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 ACTL9Q8TC94 416 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 SLC7A8Q9UHI5 535 aa17.28■□□□□ 0.36
TRIM39-201ENST00000376656 RNASEH1O60930 286 aaKnown RBP17.27■□□□□ 0.36
TRIM39-201ENST00000376656 ZACNQ401N2 412 aa17.27■□□□□ 0.36
TRIM39-201ENST00000376656 CDHR3Q6ZTQ4 885 aa17.27■□□□□ 0.36
TRIM39-201ENST00000376656 C4orf19Q8IY42 314 aa17.27■□□□□ 0.36
TRIM39-201ENST00000376656 AGBL1Q96MI9 1066 aa17.27■□□□□ 0.36
TRIM39-201ENST00000376656 OCEL1Q9H607 264 aa17.27■□□□□ 0.36
TRIM39-201ENST00000376656 ZNF395Q9H8N7 513 aaPredicted RBP17.27■□□□□ 0.36
TRIM39-201ENST00000376656 XPO7Q9UIA9 1087 aaKnown RBP17.27■□□□□ 0.36
TRIM39-201ENST00000376656 SLC18A2Q05940 514 aa17.27■□□□□ 0.36
TRIM39-201ENST00000376656 TBC1D25Q3MII6 688 aa17.27■□□□□ 0.36
TRIM39-201ENST00000376656 FAM182AQ5T1J6 154 aa17.27■□□□□ 0.36
TRIM39-201ENST00000376656 IQANK1A0A1B0GTG1 560 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 CIB2O75838 187 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 TM7SF2O76062 418 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 C4BPAP04003 597 aaKnown RBP17.27■□□□□ 0.35
TRIM39-201ENST00000376656 ETS2P15036 469 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 MMP8P22894 467 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 CRABP2P29373 138 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 NRLP54845 237 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 ACTR3P61158 418 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 MRPS9P82933 396 aaKnown RBP17.27■□□□□ 0.35
TRIM39-201ENST00000376656 TRMT5Q32P41 509 aaKnown RBP17.27■□□□□ 0.35
TRIM39-201ENST00000376656 KBTBD12Q3ZCT8 623 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 ARMC3Q5W041 872 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 CES4AQ5XG92 561 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 SMC1BQ8NDV3 1235 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 CSRNP1Q96S65 589 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 TMX2Q9Y320 296 aa17.27■□□□□ 0.35
TRIM39-201ENST00000376656 AHDC1Q5TGY3 1603 aaPredicted RBP17.27■□□□□ 0.35
TRIM39-201ENST00000376656 NDC80O14777 642 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 PYGLP06737 847 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 LIN52Q52LA3 116 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 LRRC38Q5VT99 294 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 EBF3Q9H4W6 596 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 POLIQ9UNA4 740 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 NFIBO00712 420 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 IRF6O14896 467 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 FAM155BO75949 473 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 PTPN7P35236 360 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 AP2B1P63010 937 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 MTMR1Q13613 665 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 SYCP2LQ5T4T6 812 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 C1orf146Q5VVC0 180 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 SCARA3Q6AZY7 606 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 DCUN1D2Q6PH85 259 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 RAPH1Q70E73 1250 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 ANO5Q75V66 913 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 CHURC1Q8WUH1 139 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 NDNQ99608 321 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 KAT6AQ92794 2004 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 NRXN2Q9P2S2 1712 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 TCRBV9S1A1TA0A576 114 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 KITP10721 976 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 ELK3P41970 407 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 CDK7P50613 346 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 SMTNL2Q2TAL5 461 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 ARID3BQ8IVW6 561 aaPredicted RBP17.26■□□□□ 0.35
TRIM39-201ENST00000376656 UNC45BQ8IWX7 931 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 PDIK1LQ8N165 341 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 KCNK4Q9NYG8 393 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 MARCOQ9UEW3 520 aaPredicted RBP17.26■□□□□ 0.35
TRIM39-201ENST00000376656 IKBKGQ9Y6K9 419 aa17.26■□□□□ 0.35
TRIM39-201ENST00000376656 C3orf70A6NLC5 250 aaPredicted RBP17.25■□□□□ 0.35
TRIM39-201ENST00000376656 CCNE2O96020 404 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 IL1BP01584 269 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 ACOT2P49753 483 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 HSD17B4P51659 736 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 DNAJC24Q6P3W2 148 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 PRPF39Q86UA1 669 aaKnown RBP17.25■□□□□ 0.35
TRIM39-201ENST00000376656 ARHGAP18Q8N392 663 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 SLC44A1Q8WWI5 657 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 NCSTNQ92542 709 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 SRPK1Q96SB4 655 aaKnown RBP17.25■□□□□ 0.35
TRIM39-201ENST00000376656 AGTPBP1Q9UPW5 1226 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 UBIAD1Q9Y5Z9 338 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 CCDC195A0A1B0GUA6 201 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 SPECC1L-ADORA2AF8WAN1 911 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 BUD23O43709 281 aaKnown RBP17.25■□□□□ 0.35
TRIM39-201ENST00000376656 CST8O60676 142 aa17.25■□□□□ 0.35
TRIM39-201ENST00000376656 INHBAP08476 426 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms