RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PHACTR1Q9C0D0 580 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 ACSS3Q9H6R3 686 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 POLIQ9UNA4 740 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 PARP14Q460N5 1801 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 TCRBV7S3A2A0A539 114 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 WFS1O76024 890 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 TNNC2P02585 160 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 T-ENOLP0DO92 83 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 ADRA1DP25100 572 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 TCF7P36402 384 aaPredicted RBP15.25■□□□□ 0.03
MSH5-201ENST00000375703 RASSF2P50749 326 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 NAA25Q14CX7 972 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 FYB2Q5VWT5 728 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 ZNF449Q6P9G9 518 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 RFX6Q8HWS3 928 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 ZBTB8OSQ8IWT0 167 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 PDIK1LQ8N165 341 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 SEPT1Q8WYJ6 367 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 ANKRD36BP1Q96IX9 119 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 SYNCQ9H7C4 482 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 CYLDQ9NQC7 956 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 XPO7Q9UIA9 1087 aaKnown RBP15.25■□□□□ 0.03
MSH5-201ENST00000375703 GJA3Q9Y6H8 435 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 RLFQ13129 1914 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 PHIPQ8WWQ0 1821 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 GOLGA8RI6L899 631 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 KRT19P08727 400 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 HOXC6P09630 235 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 FAM71DQ8N9W8 422 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 TCP10LQ8TDR4 215 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 FNIP1Q8TF40 1166 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 MIEF2Q96C03 454 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 DHRS4Q9BTZ2 278 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 NPHS2Q9NP85 383 aa15.25■□□□□ 0.03
MSH5-201ENST00000375703 E7ESA3 106 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 RAP1GAPP47736 663 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 EIF3EP60228 445 aaKnown RBP15.24■□□□□ 0.03
MSH5-201ENST00000375703 CRYMQ14894 314 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 TAZQ16635 292 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 TAF1BQ53T94 588 aaPredicted RBP15.24■□□□□ 0.03
MSH5-201ENST00000375703 SLC45A4Q5BKX6 768 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 NLRP9Q7RTR0 991 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 CCDC125Q86Z20 511 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 LRRC71Q8N4P6 559 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 SLC7A6OSQ96CW6 309 aaPredicted RBP15.24■□□□□ 0.03
MSH5-201ENST00000375703 KLF6Q99612 283 aaPredicted RBP15.24■□□□□ 0.03
MSH5-201ENST00000375703 WDR83Q9BRX9 315 aaKnown RBP15.24■□□□□ 0.03
MSH5-201ENST00000375703 METTL5Q9NRN9 209 aaKnown RBP15.24■□□□□ 0.03
MSH5-201ENST00000375703 ABLIM1O14639 778 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 PEX10O60683 326 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 TROVE2P10155 538 aaKnown RBP eCLIP15.24■□□□□ 0.03
MSH5-201ENST00000375703 MARK3P27448 753 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 HIRAP54198 1017 aaPredicted RBP15.24■□□□□ 0.03
MSH5-201ENST00000375703 CDH8P55286 799 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 SLC8A3P57103 927 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 BASP1P80723 227 aaKnown RBP15.24■□□□□ 0.03
MSH5-201ENST00000375703 DPYSL3Q14195 570 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 MXD4Q14582 209 aaPredicted RBP15.24■□□□□ 0.03
MSH5-201ENST00000375703 LONP2Q86WA8 852 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 KIRREL3Q8IZU9 778 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 DCAKDQ8WVC6 231 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 HSPH1Q92598 858 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 ALKBH8Q96BT7 664 aaKnown RBP15.24■□□□□ 0.03
MSH5-201ENST00000375703 CPXM1Q96SM3 734 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 TBC1D10AQ9BXI6 508 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 C12orf65Q9H3J6 166 aaKnown RBP15.24■□□□□ 0.03
MSH5-201ENST00000375703 WDR35Q9P2L0 1181 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 ZFP69BQ9UJL9 534 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 AFG3L2Q9Y4W6 797 aa15.24■□□□□ 0.03
MSH5-201ENST00000375703 SMAPO00193 183 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 C2CD2LO14523 706 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 TM9SF1O15321 606 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 RNF8O76064 485 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 TMEM63AO94886 807 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 CBX6O95503 412 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 TAF5Q15542 800 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 CDCA2Q69YH5 1023 aaPredicted RBP15.23■□□□□ 0.03
MSH5-201ENST00000375703 XYLT1Q86Y38 959 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 MAB21L3Q8N8X9 362 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 BANPQ8N9N5 519 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 CMASQ8NFW8 434 aaPredicted RBP15.23■□□□□ 0.03
MSH5-201ENST00000375703 MZB1Q8WU39 189 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 CALN1Q9BXU9 219 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 MANSC1Q9H8J5 431 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 APOC4-APOC2K7ER74 178 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 ITGBL1O95965 494 aaPredicted RBP15.23■□□□□ 0.03
MSH5-201ENST00000375703 APOC2P02655 101 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 MT-ND3P03897 115 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 RBP3P10745 1247 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 MIPP30301 263 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 ORC1Q13415 861 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 TMEM132AQ24JP5 1023 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 MPZL3Q6UWV2 235 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 EEPD1Q7L9B9 569 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 MTDHQ86UE4 582 aaKnown RBP15.23■□□□□ 0.03
MSH5-201ENST00000375703 CDR2LQ86X02 465 aaPredicted RBP15.23■□□□□ 0.03
MSH5-201ENST00000375703 ZNF276Q8N554 614 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 VPS11Q9H270 941 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 SLC17A7Q9P2U7 560 aa15.23■□□□□ 0.03
MSH5-201ENST00000375703 DCTN4Q9UJW0 460 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms