RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 IDI2Q9BXS1 227 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 CADM1Q9BY67 442 aaKnown RBP12.35□□□□□ -0.43
MCF2L-202ENST00000375597 XPNPEP1Q9NQW7 623 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 CISHQ9NSE2 258 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 I3L4J1 428 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 M0QYV0 167 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 NEMP1O14524 444 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 CFLARO15519 480 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 VNN1O95497 513 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 TPBGLP0DKB5 382 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 RPL22P35268 128 aaKnown RBP12.35□□□□□ -0.43
MCF2L-202ENST00000375597 GPC3P51654 580 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 GEMIN4P57678 1058 aaKnown RBP12.35□□□□□ -0.43
MCF2L-202ENST00000375597 GPX6P59796 221 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 ANO7Q6IWH7 933 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 ATP6V0A1Q93050 837 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 LPIN3Q9BQK8 851 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 CYP26B1Q9NR63 512 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 CYP39A1Q9NYL5 469 aa12.35□□□□□ -0.43
MCF2L-202ENST00000375597 A0A1B0GVG6 124 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 FCHO1O14526 889 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 MCF2LO15068 1137 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 ICAM1P05362 532 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 T-ENOLP0DO92 83 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 KCNA4P22459 653 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 ACSBG2Q5FVE4 666 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 MAP4K3Q8IVH8 894 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 ZCCHC9Q8N567 271 aaKnown RBP12.34□□□□□ -0.43
MCF2L-202ENST00000375597 CCHCR1Q8TD31 782 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 AGAP3Q96P47 875 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 MOV10L1Q9BXT6 1211 aaKnown RBP12.34□□□□□ -0.43
MCF2L-202ENST00000375597 MAN1C1Q9NR34 630 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 GOLGA8TH3BQL2 631 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 ZNF536O15090 1300 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 B4GALT5O43286 388 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 KIF1CO43896 1103 aaKnown RBP12.34□□□□□ -0.43
MCF2L-202ENST00000375597 ASNSP08243 561 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 TCN1P20061 433 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-202ENST00000375597 RFX1P22670 979 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 AQP5P55064 265 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 SLC25A3Q00325 362 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 KLC1Q07866 573 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 TMEM62Q0P6H9 643 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 TCHHL1Q5QJ38 904 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-202ENST00000375597 FOXR2Q6PJQ5 311 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 MON1BQ7L1V2 547 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 GBP5Q96PP8 586 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 HAPLN2Q9GZV7 340 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 RANBP17Q9H2T7 1088 aaKnown RBP12.34□□□□□ -0.43
MCF2L-202ENST00000375597 CPSF2Q9P2I0 782 aaKnown RBP12.34□□□□□ -0.43
MCF2L-202ENST00000375597 HMGXB4Q9UGU5 601 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 IP6K2Q9UHH9 426 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 FEM1BQ9UK73 627 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 EDN1P05305 212 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 GCAP28676 217 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 PHBP35232 272 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 RASA2Q15283 850 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 SLC15A2Q16348 729 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 CYP1B1Q16678 543 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 GALNTL6Q49A17 601 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 AP1ARQ63HQ0 302 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 CDHR3Q6ZTQ4 885 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 TMEM192Q8IY95 271 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 ATP11CQ8NB49 1132 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 SLC7A6OSQ96CW6 309 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-202ENST00000375597 TBC1D22BQ9NU19 505 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 C2CD2Q9Y426 696 aa12.34□□□□□ -0.43
MCF2L-202ENST00000375597 MAPTP10636 758 aaKnown RBP12.33□□□□□ -0.44
MCF2L-202ENST00000375597 GRIA1P42261 906 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 RPL10AP62906 217 aaKnown RBP12.33□□□□□ -0.44
MCF2L-202ENST00000375597 GRAMD1BQ3KR37 738 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 VWA5B1Q5TIE3 1220 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 KRT27Q7Z3Y8 459 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 SLC9A9Q8IVB4 645 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 CLEC4DQ8WXI8 215 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 TRIM4Q9C037 500 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 PXMP2Q9NR77 195 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 CLUHO75153 1309 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 TBX10O75333 385 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 RNF8O76064 485 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 LINGO3P0C6S8 592 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 VCPP55072 806 aaKnown RBP12.33□□□□□ -0.44
MCF2L-202ENST00000375597 OLIG2Q13516 323 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 TFDP3Q5H9I0 405 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 GJC2Q5T442 439 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-202ENST00000375597 IZUMO2Q6UXV1 221 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 TAS1R3Q7RTX0 852 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 NCAPG2Q86XI2 1143 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 NDUFAF2Q8N183 169 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 C12orf29Q8N999 325 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 TMEM35BQ8NCS4 154 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 RBM41Q96IZ5 413 aaKnown RBP12.33□□□□□ -0.44
MCF2L-202ENST00000375597 WRNIP1Q96S55 665 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 ZNF831Q5JPB2 1677 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 GOLGA8QA0A0J9YX86 632 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 GOLGA8OA6NCC3 632 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 GOLGA8NF8WBI6 632 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 USP12O75317 370 aa12.33□□□□□ -0.44
MCF2L-202ENST00000375597 ATXN1P54253 815 aaKnown RBP12.33□□□□□ -0.44
MCF2L-202ENST00000375597 BPIFB4P59827 614 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms