RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 PATJQ8NI35 1801 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 TRIM49BA6NDI0 452 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 CLDN5O00501 218 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 KINO60870 393 aaKnown RBP16.64■□□□□ 0.25
SDHB-201ENST00000375499 NOL4O94818 638 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 HLA-DRAP01903 254 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 CSH1P0DML2 217 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 CSH2P0DML3 217 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 PSMC3P17980 439 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 CDC25CP30307 473 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 MAGEA9P43362 315 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 MAGEA11P43364 429 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 GCLMP48507 274 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 AP3M2P53677 418 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 USP46P62068 366 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 CYP27A1Q02318 531 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 ADAM9Q13443 819 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 TAF12Q16514 161 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 ZNF667Q5HYK9 610 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 ZNF658Q5TYW1 1059 aaPredicted RBP16.64■□□□□ 0.25
SDHB-201ENST00000375499 ISM2Q6H9L7 571 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 TPRG1Q6ZUI0 275 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 MFSD6LQ8IWD5 586 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 PJA1Q8NG27 643 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 MYCBPAPQ8TBZ2 947 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 TIGD1Q96MW7 591 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 GSDMAQ96QA5 445 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 TRMT61BQ9BVS5 477 aaKnown RBP16.64■□□□□ 0.25
SDHB-201ENST00000375499 ZNF518BQ9C0D4 1074 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 GPR88Q9GZN0 384 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 SNX25Q9H3E2 840 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 TASP1Q9H6P5 420 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 BRD9Q9H8M2 597 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 APOBEC3GQ9HC16 384 aaKnown RBP16.64■□□□□ 0.25
SDHB-201ENST00000375499 FBXO4Q9UKT5 387 aa16.64■□□□□ 0.25
SDHB-201ENST00000375499 FGF19O95750 216 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 ASS1P00966 412 aaKnown RBP16.63■□□□□ 0.25
SDHB-201ENST00000375499 CD44P16070 742 aaKnown RBP16.63■□□□□ 0.25
SDHB-201ENST00000375499 PTPN1P18031 435 aaKnown RBP16.63■□□□□ 0.25
SDHB-201ENST00000375499 TARSP26639 723 aaKnown RBP16.63■□□□□ 0.25
SDHB-201ENST00000375499 PIK3CAP42336 1068 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 RPL10AP62906 217 aaKnown RBP16.63■□□□□ 0.25
SDHB-201ENST00000375499 PFKPQ01813 784 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 PRKCQQ04759 706 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 ORC1Q13415 861 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 EDRF1Q3B7T1 1238 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 COBLL1Q53SF7 1204 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 TXNDC8Q6A555 127 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 C4orf50Q6ZRC1 276 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 ZC3H3Q8IXZ2 948 aaKnown RBP16.63■□□□□ 0.25
SDHB-201ENST00000375499 MAB21L3Q8N8X9 362 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 SUMF1Q8NBK3 374 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 B3GALNT2Q8NCR0 500 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 TAS1R2Q8TE23 839 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 DEPDC1BQ8WUY9 529 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 SECISBP2LQ93073 1101 aaKnown RBP16.63■□□□□ 0.25
SDHB-201ENST00000375499 SMARCE1Q969G3 411 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 ZFYVE19Q96K21 471 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 B3GNT5Q9BYG0 378 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 MMRN2Q9H8L6 949 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 LTB4R2Q9NPC1 389 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 RMND1Q9NWS8 449 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 MAGEC2Q9UBF1 373 aaPredicted RBP16.63■□□□□ 0.25
SDHB-201ENST00000375499 MAN1B1Q9UKM7 699 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 CCL26Q9Y258 94 aa16.63■□□□□ 0.25
SDHB-201ENST00000375499 HELZP42694 1942 aaKnown RBP16.62■□□□□ 0.25
SDHB-201ENST00000375499 KANSL1LA0AUZ9 987 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 A8MXQ7 604 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 PRR5-ARHGAP8B1AHC4 643 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 F8VP50 259 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 IKBKBO14920 756 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 CLSTN1O94985 981 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 BMP6P22004 513 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 PSMC2P35998 433 aaKnown RBP16.62■□□□□ 0.25
SDHB-201ENST00000375499 ASPAP45381 313 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 ARHGAP8P85298 464 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 FCHO2Q0JRZ9 810 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 ARHGAP15Q53QZ3 475 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 INTS8Q75QN2 995 aaKnown RBP16.62■□□□□ 0.25
SDHB-201ENST00000375499 CMTM8Q8IZV2 173 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 DNASE1L2Q92874 299 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 TRMT2BQ96GJ1 504 aaKnown RBP16.62■□□□□ 0.25
SDHB-201ENST00000375499 CCDC34Q96HJ3 373 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 MYRFLQ96LU7 910 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 GCNAQ96QF7 691 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 SLC22A12Q96S37 553 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 NELL2Q99435 816 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 BCO2Q9BYV7 579 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 MYH10P35580 1976 aa16.62■□□□□ 0.25
SDHB-201ENST00000375499 FAM163BP0C2L3 166 aa16.61■□□□□ 0.25
SDHB-201ENST00000375499 RPL13P26373 211 aaKnown RBP16.61■□□□□ 0.25
SDHB-201ENST00000375499 GRIK1P39086 918 aa16.61■□□□□ 0.25
SDHB-201ENST00000375499 MCCD1P59942 119 aaPredicted RBP16.61■□□□□ 0.25
SDHB-201ENST00000375499 NOP14P78316 857 aaKnown RBP16.61■□□□□ 0.25
SDHB-201ENST00000375499 UBXN2BQ14CS0 331 aa16.61■□□□□ 0.25
SDHB-201ENST00000375499 MAPRE1Q15691 268 aaKnown RBP16.61■□□□□ 0.25
SDHB-201ENST00000375499 ANKRD40Q6AI12 368 aa16.61■□□□□ 0.25
SDHB-201ENST00000375499 VSTM1Q6UX27 236 aa16.61■□□□□ 0.25
SDHB-201ENST00000375499 PAQR9Q6ZVX9 377 aa16.61■□□□□ 0.25
SDHB-201ENST00000375499 SEMA4DQ92854 862 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms