RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 CCR1P32246 355 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 CRKLP46109 303 aaKnown RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 RNASELQ05823 741 aaKnown RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 SEZ6Q53EL9 994 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 ZNF852Q6ZMS4 543 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 PCSK9Q8NBP7 692 aaKnown RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 SLC35G2Q8TBE7 412 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 POC1BQ8TC44 478 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 TAAR9Q96RI9 348 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 SRCIN1Q9C0H9 1055 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 PAIP1Q9H074 479 aaKnown RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 PUS7LQ9H0K6 701 aaKnown RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 SNTG1Q9NSN8 517 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 A0A0D9SFI3 127 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 SH3D21A4FU49 640 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 STX16-NPEPL1H3BU86 382 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 NPC1O15118 1278 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 MAN1A2O60476 641 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 URODP06132 367 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 TTKP33981 857 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 PIK3CBP42338 1070 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 TSTQ16762 297 aaKnown RBP9.48□□□□□ -0.89
UBR4-201ENST00000375218 LRIG3Q6UXM1 1119 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 OR52K1Q8NGK4 314 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 ZKSCAN3Q9BRR0 538 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 NSMCE4AQ9NXX6 385 aa9.48□□□□□ -0.89
UBR4-201ENST00000375218 MYH2Q9UKX2 1941 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 PGM3O95394 542 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 FUT4P22083 530 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 LRRC69Q6ZNQ3 347 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 ADGRG6Q86SQ4 1221 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 HACE1Q8IYU2 909 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 CCDC63Q8NA47 563 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 CALML6Q8TD86 181 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 SEPT8Q92599 483 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 PLD4Q96BZ4 506 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 OPTNQ96CV9 577 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 CCDC43Q96MW1 224 aaKnown RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 NUSAP1Q9BXS6 441 aaKnown RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 COX16Q9P0S2 106 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 ZNF510Q9Y2H8 683 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 A0A0B4J269 797 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 CLRN2A0PK11 232 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 TPBGLP0DKB5 382 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 ERV3-1Q14264 604 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 DLGAP5Q15398 846 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 PKDCCQ504Y2 493 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 FAM209AQ5JX71 171 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 C6orf132Q5T0Z8 1188 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 MIS18BP1Q6P0N0 1132 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 ZNF704Q6ZNC4 412 aaPredicted RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 RUFY4Q6ZNE9 571 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 TADA2BQ86TJ2 420 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 SRBD1Q8N5C6 995 aaKnown RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 TTLL11Q8NHH1 800 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 KIAA1143Q96AT1 154 aaPredicted RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 TMEM74Q96NL1 305 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 SENP6Q9GZR1 1112 aaPredicted RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 C2orf40Q9H1Z8 148 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 BHMT2Q9H2M3 363 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 GREM2Q9H772 168 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 TMEM206Q9H813 350 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 TNFSF13BQ9Y275 285 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 MAP4K5Q9Y4K4 846 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 TELO2Q9Y4R8 837 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 PCP4L1A6NKN8 68 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 SPDYE3A6NKU9 549 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 PHF20L1A8MW92 1017 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 ATXN7O15265 892 aaPredicted RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 GREM1O60565 184 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 DKK1O94907 266 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 ENO2P09104 434 aaPredicted RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 IL15P40933 162 aaPredicted RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 ACTR1AP61163 376 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 TFCP2Q12800 502 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 ZRSR1Q15695 479 aaKnown RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 NIPA2Q8N8Q9 360 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 FAM20AQ96MK3 541 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 DPH5Q9H2P9 285 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 SENP1Q9P0U3 644 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 DACH1Q9UI36 760 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 RPH3AQ9Y2J0 694 aaPredicted RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 SLC9B1P1A6NJY1 282 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 LRG1P02750 347 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 JMJD7P0C870 316 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 PEX2P28328 305 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 ACSL1P33121 698 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 VBP1P61758 197 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 CUL4AQ13619 759 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 SQLEQ14534 574 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 FBXO43Q4G163 708 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 NXPE4Q6UWF7 544 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 ADGRA1Q86SQ6 560 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 SHCBP1Q8NEM2 672 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 GRK7Q8WTQ7 553 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 RBM41Q96IZ5 413 aaKnown RBP9.47□□□□□ -0.89
UBR4-201ENST00000375218 ANKRD2Q9GZV1 360 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 TM9SF3Q9HD45 589 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 NMRK2Q9NPI5 230 aa9.47□□□□□ -0.89
UBR4-201ENST00000375218 PSME2Q9UL46 239 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms