RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 BCO2Q9BYV7 579 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 CDC42EP4Q9H3Q1 356 aaKnown RBP12.74□□□□□ -0.37
HMGCL-202ENST00000374487 PDZD7Q9H5P4 517 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 ASB7Q9H672 318 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 TUT1Q9H6E5 874 aaKnown RBP12.74□□□□□ -0.37
HMGCL-202ENST00000374487 PRDM5Q9NQX1 630 aaPredicted RBP12.74□□□□□ -0.37
HMGCL-202ENST00000374487 DDX56Q9NY93 547 aaKnown RBP12.74□□□□□ -0.37
HMGCL-202ENST00000374487 ZNF148Q9UQR1 794 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 TRIM43BA6NCK2 446 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 GMNCA6NCL1 334 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 MOXD2PA6NHM9 499 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 SRRM3A6NNA2 597 aaPredicted RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 TP73O15350 636 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 ACSL3O95573 720 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 FAM107AO95990 144 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 ARF4P18085 180 aaPredicted RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 PSMA2P25787 234 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 ATICP31939 592 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 RAD23BP54727 409 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 COPS2P61201 443 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 PSMC1P62191 440 aaKnown RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 OGDHQ02218 1023 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 AMHR2Q16671 573 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 PPP1R15BQ5SWA1 713 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 UBAP2Q5T6F2 1119 aaKnown RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 MTHFD1LQ6UB35 978 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 MFSD7Q6UXD7 560 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 ANKS1BQ7Z6G8 1248 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 EPS8L3Q8TE67 593 aaKnown RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 EMID1Q96A84 441 aaPredicted RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 TRIM43Q96BQ3 446 aaPredicted RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 FAXDC2Q96IV6 333 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 C16orf70Q9BSU1 422 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 TRPV6Q9H1D0 765 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 SMYD3Q9H7B4 428 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 LRRD1A4D1F6 860 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 ANKRD65E5RJM6 399 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 AGTP01019 485 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 RFC1P35251 1148 aaPredicted RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 CHKAP35790 457 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 FAAP100Q0VG06 881 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 ITGA7Q13683 1181 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 HIC1Q14526 733 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 TMEM132DQ14C87 1099 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 SNX17Q15036 470 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 PTPN20Q4JDL3 420 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 TFDP3Q5H9I0 405 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 RHBDF2Q6PJF5 856 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 SPOCD1Q6ZMY3 1216 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 IFNLR1Q8IU57 520 aaPredicted RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 C10orf67Q8IYJ2 551 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 MYCBPAPQ8TBZ2 947 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 ZNF473Q8WTR7 871 aaKnown RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 HPDLQ96IR7 371 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 ACAP3Q96P50 834 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 SELENOSQ9BQE4 189 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 ADPGKQ9BRR6 497 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 DDX23Q9BUQ8 820 aaKnown RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 TMEM109Q9BVC6 243 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 ROPN1BQ9BZX4 212 aaPredicted RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 ROPN1Q9HAT0 212 aaPredicted RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 DNAJC17Q9NVM6 304 aaKnown RBP12.73□□□□□ -0.37
HMGCL-202ENST00000374487 AGAP1Q9UPQ3 857 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 COL1A2P08123 1366 aa12.73□□□□□ -0.37
HMGCL-202ENST00000374487 SIGLEC16A6NMB1 481 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 TULP2O00295 520 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 LIASO43766 372 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 CPT1AP50416 773 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 CDK7P50613 346 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 IFI35P80217 286 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-202ENST00000374487 PLCB3Q01970 1234 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 PTPN11Q06124 597 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-202ENST00000374487 NBPF20Q3BBV1 942 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 SLC10A6Q3KNW5 377 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 IZUMO3Q5VZ72 239 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 LINC01465Q8N7H1 131 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 NIPA2Q8N8Q9 360 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 CCHCR1Q8TD31 782 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 ACSF2Q96CM8 615 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-202ENST00000374487 TMEM176AQ96HP8 235 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 HEXIM2Q96MH2 286 aaKnown RBP12.72□□□□□ -0.37
HMGCL-202ENST00000374487 SDCBP2Q9H190 292 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 CYP3A43Q9HB55 503 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 AAASQ9NRG9 546 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 TRMT13Q9NUP7 481 aaKnown RBP12.72□□□□□ -0.37
HMGCL-202ENST00000374487 FAM169AQ9Y6X4 670 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 LAMA3Q16787 3333 aa12.72□□□□□ -0.37
HMGCL-202ENST00000374487 LAMA2P24043 3122 aaKnown RBP12.72□□□□□ -0.37
HMGCL-202ENST00000374487 ARVCFO00192 962 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 TRAPPC3O43617 180 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 TTC4O95801 387 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 ZNF200P98182 395 aaPredicted RBP12.71□□□□□ -0.37
HMGCL-202ENST00000374487 KYNUQ16719 465 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 HADHQ16836 314 aaKnown RBP12.71□□□□□ -0.37
HMGCL-202ENST00000374487 TXNRD3NBQ6F5E7 133 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 MICALCLQ6ZW33 695 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 TAOK1Q7L7X3 1001 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 SPATS2Q86XZ4 545 aaKnown RBP12.71□□□□□ -0.37
HMGCL-202ENST00000374487 TMEM130Q8N3G9 435 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms