RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ITIH2P19823 946 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 PSMC1P62191 440 aaKnown RBP13.24□□□□□ -0.29
PRPF4-202ENST00000374199 CAV1Q03135 178 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 TRIM32Q13049 653 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 NOGQ13253 232 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 MFSD7Q6UXD7 560 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 ANKRD52Q8NB46 1076 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 FBXO25Q8TCJ0 367 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 RIN2Q8WYP3 895 aaPredicted RBP13.24□□□□□ -0.29
PRPF4-202ENST00000374199 RAPGEF5Q92565 580 aa13.24□□□□□ -0.29
PRPF4-202ENST00000374199 FEZ2Q9UHY8 353 aaPredicted RBP13.24□□□□□ -0.29
PRPF4-202ENST00000374199 HSF2BPO75031 334 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 TRUB2O95900 331 aaKnown RBP13.23□□□□□ -0.29
PRPF4-202ENST00000374199 KRT7P08729 469 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 PAX3P23760 479 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 LILRA4P59901 499 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 SV2CQ496J9 727 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 PMF1Q6P1K2 205 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 FAM183BPQ6ZVS7 135 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 BBS12Q6ZW61 710 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 PXYLP1Q8TE99 480 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 NT5C3BQ969T7 300 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 SCLT1Q96NL6 688 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 PABPC3Q9H361 631 aaKnown RBP13.23□□□□□ -0.29
PRPF4-202ENST00000374199 GIT1Q9Y2X7 761 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 GNRH1P01148 92 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 AKAP5P24588 427 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 PTPN9P43378 593 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 PTK7Q13308 1070 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 CD300LGQ6UXG3 332 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 PHLDB2Q86SQ0 1253 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 ALLCQ8N6M5 410 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 KCTD13Q8WZ19 329 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 HEXIM2Q96MH2 286 aaKnown RBP13.23□□□□□ -0.29
PRPF4-202ENST00000374199 PEBP4Q96S96 227 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 CNPY3Q9BT09 278 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 ADAM7Q9H2U9 754 aa13.23□□□□□ -0.29
PRPF4-202ENST00000374199 METTL5Q9NRN9 209 aaKnown RBP13.23□□□□□ -0.29
PRPF4-202ENST00000374199 RARGP13631 454 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 GOLGA7BQ2TAP0 167 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 ATP13A4Q4VNC1 1196 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 SLC26A9Q7LBE3 791 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 C12orf29Q8N999 325 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 PIWIL1Q96J94 861 aaKnown RBP13.22□□□□□ -0.29
PRPF4-202ENST00000374199 HNRNPABQ99729 332 aaKnown RBP13.22□□□□□ -0.29
PRPF4-202ENST00000374199 SRRM3A6NNA2 597 aaPredicted RBP13.22□□□□□ -0.29
PRPF4-202ENST00000374199 TCEA3O75764 348 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 TJP3O95049 919 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 RARBP10826 455 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 KDELR1P24390 212 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 TAF6P49848 677 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 EIF3BP55884 814 aaKnown RBP13.22□□□□□ -0.29
PRPF4-202ENST00000374199 KRT17Q04695 432 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 ORC1Q13415 861 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 CCDC14Q49A88 953 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 AGBL2Q5U5Z8 902 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 HIBCHQ6NVY1 386 aaPredicted RBP13.22□□□□□ -0.29
PRPF4-202ENST00000374199 ADAT2Q7Z6V5 191 aaKnown RBP13.22□□□□□ -0.29
PRPF4-202ENST00000374199 PPP1R13LQ8WUF5 828 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 ARL8AQ96BM9 186 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 TLCD1Q96CP7 247 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 PKMYT1Q99640 499 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 DPEP3Q9H4B8 488 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 ST3GAL5Q9UNP4 418 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 PLAAQ9Y263 795 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 E5RJQ4 531 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 CABYRO75952 493 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 C6orf222P0C671 652 aaPredicted RBP13.22□□□□□ -0.29
PRPF4-202ENST00000374199 CCND3P30281 292 aaPredicted RBP13.22□□□□□ -0.29
PRPF4-202ENST00000374199 SLC6A3Q01959 620 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 GNASQ5JWF2 1037 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 KDM7AQ6ZMT4 941 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 PAQR9Q6ZVX9 377 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 ZNF598Q86UK7 904 aaKnown RBP13.22□□□□□ -0.29
PRPF4-202ENST00000374199 TSEN34Q9BSV6 310 aaKnown RBP13.22□□□□□ -0.29
PRPF4-202ENST00000374199 FOXP3Q9BZS1 431 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 FAM204AQ9H8W3 233 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 ASNSD1Q9NWL6 643 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 RNF186Q9NXI6 227 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 SNX9Q9Y5X1 595 aa13.22□□□□□ -0.29
PRPF4-202ENST00000374199 PAPSS1O43252 624 aaPredicted RBP13.21□□□□□ -0.29
PRPF4-202ENST00000374199 CD19P15391 556 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 BST2Q10589 180 aaKnown RBP13.21□□□□□ -0.29
PRPF4-202ENST00000374199 CFAP58Q5T655 872 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 CXCL17Q6UXB2 119 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 OSTM1Q86WC4 334 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 C1orf54Q8WWF1 131 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
PRPF4-202ENST00000374199 RTP4Q96DX8 246 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 SNF8Q96H20 258 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 HSFY1Q96LI6 401 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 SLC38A7Q9NVC3 462 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 VPS18Q9P253 973 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 HMGB1P1B2RPK0 211 aaPredicted RBP13.21□□□□□ -0.29
PRPF4-202ENST00000374199 MDM4O15151 490 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 CYP11A1P05108 521 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 ASGR1P07306 291 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 IL4RP24394 825 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 PSMA2P25787 234 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms