RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 GPAT2Q6NUI2 795 aa18.59■□□□□ 0.57
VPS26A-202ENST00000373382 ADGRD1Q6QNK2 874 aa18.59■□□□□ 0.57
VPS26A-202ENST00000373382 ZBTB33Q86T24 672 aa18.59■□□□□ 0.57
VPS26A-202ENST00000373382 RBM15BQ8NDT2 890 aaKnown RBP18.59■□□□□ 0.57
VPS26A-202ENST00000373382 WDR83Q9BRX9 315 aaKnown RBP18.59■□□□□ 0.57
VPS26A-202ENST00000373382 VPS11Q9H270 941 aa18.59■□□□□ 0.57
VPS26A-202ENST00000373382 ACSS3Q9H6R3 686 aa18.59■□□□□ 0.57
VPS26A-202ENST00000373382 SLC9A2Q9UBY0 812 aa18.59■□□□□ 0.57
VPS26A-202ENST00000373382 TRIM49D1C9J1S8 452 aa18.58■□□□□ 0.57
VPS26A-202ENST00000373382 PIK3R2O00459 728 aa18.58■□□□□ 0.57
VPS26A-202ENST00000373382 PRPF39Q86UA1 669 aaKnown RBP18.58■□□□□ 0.57
VPS26A-202ENST00000373382 SYTL5Q8TDW5 730 aaPredicted RBP18.58■□□□□ 0.57
VPS26A-202ENST00000373382 DCAKDQ8WVC6 231 aa18.58■□□□□ 0.57
VPS26A-202ENST00000373382 JDP2Q8WYK2 163 aa18.58■□□□□ 0.57
VPS26A-202ENST00000373382 KRT82Q9NSB4 513 aa18.58■□□□□ 0.57
VPS26A-202ENST00000373382 WDR35Q9P2L0 1181 aa18.58■□□□□ 0.57
VPS26A-202ENST00000373382 USP21Q9UK80 565 aa18.58■□□□□ 0.57
VPS26A-202ENST00000373382 IQANK1A0A1B0GTG1 560 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.58■□□□□ 0.56
VPS26A-202ENST00000373382 TXNDC9O14530 226 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 ZNF862O60290 1169 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 OPHN1O60890 802 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 NPR1P16066 1061 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 ACO1P21399 889 aaKnown RBP18.58■□□□□ 0.56
VPS26A-202ENST00000373382 ALDH1B1P30837 517 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 CDKN2BP42772 138 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 EPHB1P54762 984 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 CDHR3Q6ZTQ4 885 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 TREML1Q86YW5 311 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 ARHGAP24Q8N264 748 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 GALNT15Q8N3T1 639 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 PPP1R14CQ8TAE6 165 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 MSTO1Q9BUK6 570 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 ZNF541Q9H0D2 1346 aa18.58■□□□□ 0.56
VPS26A-202ENST00000373382 MAGEA13PA6NCF6 341 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 DLDP09622 509 aaKnown RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 HIRAP54198 1017 aaPredicted RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 ZNF200P98182 395 aaPredicted RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 NCOA4Q13772 614 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 TAF5Q15542 800 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 RIPOR1Q6ZS17 1223 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 KCTD6Q8NC69 237 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 SHKBP1Q8TBC3 707 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 ST6GALNAC4Q9H4F1 302 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 TLE6Q9H808 572 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 STX18Q9P2W9 335 aaKnown RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 COL24A1Q17RW2 1714 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 SIGLEC16A6NMB1 481 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 TM9SF1O15321 606 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 HNRNPCL1O60812 293 aaKnown RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 STAM2O75886 525 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 RFC1P35251 1148 aaPredicted RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 AP1B1Q10567 949 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 SGSM1Q2NKQ1 1148 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 NPNTQ6UXI9 565 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 MFN1Q8IWA4 741 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 SERPINA10Q9UK55 444 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 TCRBV9S1A1TA0A576 114 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 F5H423 210 aaPredicted RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 C4BPAP04003 597 aaKnown RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 RBP3P10745 1247 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 AQP5P55064 265 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 EIF3EP60228 445 aaKnown RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 SNRPFP62306 86 aaKnown RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 CHI3L2Q15782 390 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 DARS2Q6PI48 645 aaKnown RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 EGFL6Q8IUX8 553 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 SCUBE1Q8IWY4 988 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 ZNF276Q8N554 614 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 EFCAB3Q8N7B9 438 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 POU5F2Q8N7G0 328 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 USP6NLQ92738 828 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 ZNF668Q96K58 619 aaPredicted RBP18.57■□□□□ 0.56
VPS26A-202ENST00000373382 FBXL18Q96ME1 805 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 TUBB6Q9BUF5 446 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 ZNRF3Q9ULT6 936 aa18.57■□□□□ 0.56
VPS26A-202ENST00000373382 EXTL3O43909 919 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 RAD17O75943 681 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 CST3P01034 146 aaPredicted RBP18.56■□□□□ 0.56
VPS26A-202ENST00000373382 MMP8P22894 467 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 SLC18A1P54219 525 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 OCRLQ01968 901 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 TRIM72Q6ZMU5 477 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 FAM160B2Q86V87 743 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 PHF13Q86YI8 300 aaPredicted RBP18.56■□□□□ 0.56
VPS26A-202ENST00000373382 CCDC33Q8N5R6 958 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 SKA1Q96BD8 255 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 SRPK1Q96SB4 655 aaKnown RBP18.56■□□□□ 0.56
VPS26A-202ENST00000373382 TRIM56Q9BRZ2 755 aaKnown RBP18.56■□□□□ 0.56
VPS26A-202ENST00000373382 CYP4F11Q9HBI6 524 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 NDE1Q9NXR1 346 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 NXF1Q9UBU9 619 aaKnown RBP18.56■□□□□ 0.56
VPS26A-202ENST00000373382 ASB3Q9Y575 518 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 PCDHA10Q9Y5I2 948 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 UBIAD1Q9Y5Z9 338 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 NRAPQ86VF7 1730 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 TOP3BO95985 862 aaKnown RBP18.56■□□□□ 0.56
VPS26A-202ENST00000373382 CAP2P40123 477 aa18.56■□□□□ 0.56
VPS26A-202ENST00000373382 OSTNP61366 133 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms