RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 XPO7Q9UIA9 1087 aaKnown RBP13.84□□□□□ -0.19
NCDN-203ENST00000373253 CASTOR2A6NHX0 329 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 CLDN5O00501 218 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 PIGHQ14442 188 aaPredicted RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 GPR142Q7Z601 462 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 CCDC110Q8TBZ0 833 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 PIWIL1Q96J94 861 aaKnown RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 NCAPGQ9BPX3 1015 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 PITPNM3Q9BZ71 974 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 ELOVL4Q9GZR5 314 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 TMEM59LQ9UK28 342 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 FNDC3AQ9Y2H6 1198 aaKnown RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 DLEC1Q9Y238 1755 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 A0A0G2JLL6 359 aaPredicted RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 MMP8P22894 467 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 ABCD1P33897 745 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 FNTAP49354 379 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 LMNB2Q03252 620 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 PPIL2Q13356 520 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 RWDD4Q6NW29 188 aaKnown RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 ZDHHC24Q6UX98 284 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 PRRT2Q7Z6L0 340 aaPredicted RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 CTU1Q7Z7A3 348 aaKnown RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 CXCL16Q9H2A7 254 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 GRHL1Q9NZI5 618 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 NAALADL1Q9UQQ1 740 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 A0A0G2JND7 137 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 MAGEB2O15479 319 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 ERBB2P04626 1255 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 MAP2K2P36507 400 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 PLEKHH3Q7Z736 793 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 SCN4BQ8IWT1 228 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 LRRC8CQ8TDW0 803 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 DDX27Q96GQ7 796 aaKnown RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 MRPL45Q9BRJ2 306 aaKnown RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 NIFKQ9BYG3 293 aaKnown RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 MAGEB5Q9BZ81 275 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 NINJ2Q9NZG7 142 aa13.83□□□□□ -0.2
NCDN-203ENST00000373253 MARCOQ9UEW3 520 aaPredicted RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 CPSF3Q9UKF6 684 aaKnown RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 TPX2Q9ULW0 747 aaKnown RBP13.83□□□□□ -0.2
NCDN-203ENST00000373253 SRGAP2BP0DMP2 458 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 ECHS1P30084 290 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 GNL1P36915 607 aaPredicted RBP13.82□□□□□ -0.2
NCDN-203ENST00000373253 PTGIRP43119 386 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 CRADDP78560 199 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 SLC10A6Q3KNW5 377 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 PPP1R26Q5T8A7 1209 aaPredicted RBP13.82□□□□□ -0.2
NCDN-203ENST00000373253 USP33Q8TEY7 942 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 APOL2Q9BQE5 337 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 TINF2Q9BSI4 451 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 TTC4O95801 387 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 HOXC6P09630 235 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 SMPD1P17405 629 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 ACO1P21399 889 aaKnown RBP13.82□□□□□ -0.2
NCDN-203ENST00000373253 ROR1Q01973 937 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 C1QBPQ07021 282 aaKnown RBP13.82□□□□□ -0.2
NCDN-203ENST00000373253 CCDC91Q7Z6B0 441 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 ANKS1BQ7Z6G8 1248 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 EXOC8Q8IYI6 725 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 DNAAF3Q8N9W5 541 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 AGR3Q8TD06 166 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 TRABDQ9H4I3 376 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 KLHL14Q9P2G3 628 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 G3BP2Q9UN86 482 aaKnown RBP13.82□□□□□ -0.2
NCDN-203ENST00000373253 TREHO43280 583 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 FAM107AO95990 144 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 POMCP01189 267 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 MXRA7P84157 204 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 EFTUD2Q15029 972 aaKnown RBP eCLIP13.82□□□□□ -0.2
NCDN-203ENST00000373253 LRIG3Q6UXM1 1119 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 ARHGEF18Q6ZSZ5 1173 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 EXD1Q8NHP7 514 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 SLC2A14Q8TDB8 520 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 CLEC4CQ8WTT0 213 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 EDEM1Q92611 657 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 RNF39Q9H2S5 420 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 DPEP3Q9H4B8 488 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 TMEM134Q9H6X4 195 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 HAUS2Q9NVX0 235 aa13.82□□□□□ -0.2
NCDN-203ENST00000373253 CNTNAP2Q9UHC6 1331 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 ZC3H4Q9UPT8 1303 aaKnown RBP13.81□□□□□ -0.2
NCDN-203ENST00000373253 A0A087WUV0 522 aaPredicted RBP13.81□□□□□ -0.2
NCDN-203ENST00000373253 MEFVO15553 781 aaPredicted RBP13.81□□□□□ -0.2
NCDN-203ENST00000373253 MT-ND3P03897 115 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 GPD1P21695 349 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 ARL4CP56559 192 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 RFX8Q6ZV50 586 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 TLK2Q86UE8 772 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 GIMAP7Q8NHV1 300 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 SLITRK1Q96PX8 696 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 SMYD2Q9NRG4 433 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 DDX20Q9UHI6 824 aaKnown RBP13.81□□□□□ -0.2
NCDN-203ENST00000373253 CPP00450 1065 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 GJA5P36382 358 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 GDF10P55107 478 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 MBTD1Q05BQ5 628 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 AUHQ13825 339 aaKnown RBP13.81□□□□□ -0.2
NCDN-203ENST00000373253 UNC45BQ8IWX7 931 aa13.81□□□□□ -0.2
NCDN-203ENST00000373253 BBOF1Q8ND07 529 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms