RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 PWP1Q13610 501 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 CLEC16AQ2KHT3 1053 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 FAM83EQ2M2I3 478 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 SDE2Q6IQ49 451 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 PRR23AA6NEV1 266 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 LRG1P02750 347 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 TARSP26639 723 aaKnown RBP23■■□□□ 1.27
TM9SF3-201ENST00000371142 GRB10Q13322 594 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 AASDHQ4L235 1098 aaPredicted RBP23■■□□□ 1.27
TM9SF3-201ENST00000371142 C4orf22Q6V702 233 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 DNAJC9Q8WXX5 260 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 TRMT6Q9UJA5 497 aaKnown RBP23■■□□□ 1.27
TM9SF3-201ENST00000371142 GUCA1CO95843 209 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 CCDC142Q17RM4 750 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 ARMC6Q6NXE6 501 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 GTF3C2Q8WUA4 911 aaPredicted RBP22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 ZSWIM1Q9BR11 485 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 CCT8L1PA6NM43 557 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 AP1G2O75843 785 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 ANXA9O76027 345 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 GPRASP2Q96D09 838 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 SOAT2O75908 522 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 RAP1GAPP47736 663 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 ACOT1Q86TX2 421 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 RPRD1AQ96P16 312 aaPredicted RBP22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 MAP3K14Q99558 947 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 DIS3LQ8TF46 1054 aaKnown RBP22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 GPR75-ASB3A0A0A6YYF3 556 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 PRR23D1E9PI22 279 aaPredicted RBP22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 MED24O75448 989 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 PRR23D2P0DMB1 279 aaPredicted RBP22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 CYP11B2P19099 503 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 ACO1P21399 889 aaKnown RBP22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 FDFT1P37268 417 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 ZNF177Q13360 481 aaPredicted RBP22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 CCDC81Q6ZN84 652 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 ERGIC2Q96RQ1 377 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 ECSITQ9BQ95 431 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 SYTL2Q9HCH5 934 aa22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 UBQLN1Q9UMX0 589 aaKnown RBP22.99■■□□□ 1.27
TM9SF3-201ENST00000371142 VWA5AO00534 786 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 EPS8L3Q8TE67 593 aaKnown RBP22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 CCT7Q99832 543 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 SCN3BQ9NY72 215 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 RNF112Q9ULX5 631 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 FOXN3O00409 490 aaPredicted RBP22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 PSTPIP1O43586 416 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 GSNP06396 782 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 TBL3Q12788 808 aaKnown RBP22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 VPS37AQ8NEZ2 397 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 CNBD2Q96M20 576 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 HNRNPRO43390 633 aaKnown RBP22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 CELF2O95319 508 aaKnown RBP22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 HUNKP57058 714 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 ITPK1Q13572 414 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 HIST2H2ACQ16777 129 aaPredicted RBP22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 HIST2H2AA3Q6FI13 130 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 IYDQ6PHW0 289 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 TNIP2Q8NFZ5 429 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 USE1Q9NZ43 259 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 RUVBL2Q9Y230 463 aaKnown RBP22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 TARBP1Q13395 1621 aaKnown RBP22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 USP31Q70CQ4 1352 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 TRPC5OSA6NMA1 111 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 CCND1P24385 295 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 CBWD2Q8IUF1 395 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 CPB2Q96IY4 423 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 SMAD5Q99717 465 aaKnown RBP22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 GPATCH2LQ9NWQ4 482 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 TRIM66O15016 1216 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 DDX39BQ13838 428 aaKnown RBP22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 BBS7Q8IWZ6 715 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 RBBP8Q99708 897 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 IL25Q9H293 177 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 RPS6KL1Q9Y6S9 549 aa22.98■■□□□ 1.27
TM9SF3-201ENST00000371142 UBE2Q2LH0YL09 131 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 ICAM1P05362 532 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 PTGISQ16647 500 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 ARHGAP15Q53QZ3 475 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 BOLA3Q53S33 107 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 NMRK2Q9NPI5 230 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 SERPINB5P36952 375 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 XRRA1Q6P2D8 792 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 KAT2BQ92831 832 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 PNPLA6Q8IY17 1366 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 SUPT7LO94864 414 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 DPEP1P16444 411 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 RUNX1T1Q06455 604 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 EFL1Q7Z2Z2 1120 aaKnown RBP22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 P3H2Q8IVL5 708 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 FAM136AQ96C01 138 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 PRPF18Q99633 342 aaKnown RBP22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 THUMPD3Q9BV44 507 aaKnown RBP22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 GTF3C4Q9UKN8 822 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 TPST1O60507 370 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 MLNP12872 115 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 ALDH7A1P49419 539 aaKnown RBP22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 GEMP55040 296 aa22.97■■□□□ 1.27
TM9SF3-201ENST00000371142 SETD3Q86TU7 594 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms