RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 DDR1Q08345 913 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 ACOT1Q86TX2 421 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 ARMC2Q8NEN0 867 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 THTPAQ9BU02 230 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 SPATC1LQ9H0A9 340 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 SEMA4AQ9H3S1 761 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 YY1AP1Q9H869 796 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 USP18Q9UMW8 372 aa12.33□□□□□ -0.44
DEPDC1-201ENST00000370966 RASSF10A6NK89 507 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 NDUFS3O75489 264 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 RPLP2P05387 115 aaKnown RBP12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 EEF1DP29692 281 aaKnown RBP12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 KLC1Q07866 573 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 FUT2Q10981 343 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 CHI3L2Q15782 390 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 LRRC8EQ6NSJ5 796 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 C16orf89Q6UX73 402 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 ANGPTL8Q6UXH0 198 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 KDELC2Q7Z4H8 507 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 APBB2Q92870 758 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 TBCBQ99426 244 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 ASB7Q9H672 318 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 RPS6KL1Q9Y6S9 549 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 SDR42E2A6NKP2 422 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 IGF2BP3O00425 579 aaKnown RBP eCLIP12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 WNT10BO00744 389 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 MYO1DO94832 1006 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 MYCP01106 439 aaPredicted RBP12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 VCPP55072 806 aaKnown RBP12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 LAMTOR4Q0VGL1 99 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 MED21Q13503 144 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 SPDYCQ5MJ68 293 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 TMC3Q7Z5M5 1100 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 LRRN4CLQ8ND94 238 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 FAM111AQ96PZ2 611 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 ADARB2Q9NS39 739 aaKnown RBP12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 ZNF212Q9UDV6 495 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 SNX5Q9Y5X3 404 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 SLC30A1Q9Y6M5 507 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 ZNF263O14978 683 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 ADCY3O60266 1144 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 GTF2A2P52657 109 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 CAPRIN1Q14444 709 aaKnown RBP12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 RFX8Q6ZV50 586 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 BRSK2Q8IWQ3 736 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 IPMKQ8NFU5 416 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 DTX3LQ8TDB6 740 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 FAM172AQ8WUF8 416 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 ELMO2Q96JJ3 720 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 GDF3Q9NR23 364 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 SMIM22K7EJ46 135 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 NEMP1O14524 444 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 GRIN3BO60391 1043 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 PSMD10O75832 226 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 CNTFP26441 200 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 ZNF268Q14587 947 aaPredicted RBP12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 INPP5AQ14642 412 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 SLC26A11Q86WA9 606 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 SLC9A9Q8IVB4 645 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 KIF2BQ8N4N8 673 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 HDAC7Q8WUI4 952 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 WDCPQ9H6R7 721 aa12.32□□□□□ -0.44
DEPDC1-201ENST00000370966 MAP2K7O14733 419 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 MEIS2O14770 477 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 MIIPQ5JXC2 388 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 ARHGEF19Q8IW93 802 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 RXFP2Q8WXD0 754 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 SLITRK1Q96PX8 696 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 TMEM121Q9BTD3 319 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 YIPF3Q9GZM5 350 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 LSM7Q9UK45 103 aaKnown RBP12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 RICTORQ6R327 1708 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 WTIPA6NIX2 430 aaPredicted RBP12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 CXCL11O14625 94 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 TIMM44O43615 452 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 ENO3P13929 434 aaPredicted RBP12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 ACO1P21399 889 aaKnown RBP12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 KRT33BQ14525 404 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 FAXCQ5TGI0 409 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 SLC30A10Q6XR72 485 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 NLRP9Q7RTR0 991 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 LRP10Q7Z4F1 713 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 MSL3Q8N5Y2 521 aaKnown RBP12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 CXorf38Q8TB03 319 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 DCLK3Q9C098 648 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 LRRC4BQ9NT99 713 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 OLA1Q9NTK5 396 aaKnown RBP12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 KIF1AQ12756 1690 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 ACKR2O00590 384 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 FBXO21O94952 628 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 CYBBP04839 570 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 PYGMP11217 842 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 ODC1P11926 461 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 TGM2P21980 687 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 HADHAP40939 763 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 ZNF157P51786 506 aaPredicted RBP12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 CNGA3Q16281 694 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms