RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 ZBED4O75132 1171 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 C6P13671 934 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 HNRNPH3P31942 346 aaKnown RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 WNT5AP41221 380 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 MTIF2P46199 727 aaKnown RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 IFNAR2P48551 515 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 CLNS1AP54105 237 aaKnown RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 HADHBP55084 474 aaKnown RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 C1QBPQ07021 282 aaKnown RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 ACTN3Q08043 901 aaPredicted RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 AOC3Q16853 763 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 ALG11Q2TAA5 492 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 OXLD1Q5BKU9 147 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 FIGNQ5HY92 759 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 CCDC62Q6P9F0 684 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 SLC2A7Q6PXP3 512 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 PRRT2Q7Z6L0 340 aaPredicted RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 FAM160B2Q86V87 743 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 MON1AQ86VX9 555 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 C12orf56Q8IXR9 622 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 CCDC33Q8N5R6 958 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 PPP1R35Q8TAP8 253 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 BAHD1Q8TBE0 780 aaPredicted RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 RMDN2Q96LZ7 410 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 PNMA5Q96PV4 448 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 SLC38A10Q9HBR0 1119 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 SPATA7Q9P0W8 599 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 ORC3Q9UBD5 711 aaPredicted RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 TMED5Q9Y3A6 229 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 MRPL11Q9Y3B7 192 aaKnown RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 TIMM22Q9Y584 194 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 UBIAD1Q9Y5Z9 338 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 RGSL1A5PLK6 1076 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 CTAG2O75638 210 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 DGAT1O75907 488 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 STAU1O95793 577 aaKnown RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 SLFN14P0C7P3 912 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 GAP43P17677 238 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 RFC2P35250 354 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 SCTRP47872 440 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 TFAP4Q01664 338 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 CCDC173Q0VFZ6 552 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 TRIM32Q13049 653 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 PUM1Q14671 1186 aaKnown RBP eCLIP4.18□□□□□ -1.74
MCF2-203ENST00000370576 IFIT1BQ5T764 474 aaKnown RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 SEZ6L2Q6UXD5 910 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 TAOK1Q7L7X3 1001 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 BNIPLQ7Z465 357 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 CAND1Q86VP6 1230 aaKnown RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 IQCA1Q86XH1 822 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 SCUBE1Q8IWY4 988 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 BLIDQ8IZY5 108 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 LINC01465Q8N7H1 131 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 CLRN3Q8NCR9 226 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 ATP2A3Q93084 1043 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 LRRC45Q96CN5 670 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 KATNBL1Q9H079 304 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 SIRT3Q9NTG7 399 aaPredicted RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 KIAA1468Q9P260 1216 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 LIMA1Q9UHB6 759 aaKnown RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 FEM1BQ9UK73 627 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 R3HCC1Q9Y3T6 440 aaKnown RBP4.18□□□□□ -1.74
MCF2-203ENST00000370576 JRKLQ9Y4A0 524 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 OBSL1O75147 1896 aa4.18□□□□□ -1.74
MCF2-203ENST00000370576 TCRBV16S1A1N1A0A5B0 115 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 H3BML4 177 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 UBXN8O00124 270 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 IFIT3O14879 490 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 WDR46O15213 610 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 PPP1R12BO60237 982 aaPredicted RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 TACC1O75410 805 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 PIAS2O75928 621 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 SNUPNO95149 360 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 C22orf31O95567 290 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 CSF1P09603 554 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 VAV1P15498 845 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 CSTF2P33240 577 aaKnown RBP eCLIP4.17□□□□□ -1.74
MCF2-203ENST00000370576 IDUAP35475 653 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 SCNN1GP51170 649 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 ERVK-9P63128 1117 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 CDK17Q00537 523 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 RUNX1T1Q06455 604 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 USP4Q13107 963 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 FRG1Q14331 258 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 OASLQ15646 514 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 ZYXQ15942 572 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 CNGA2Q16280 664 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 NRN1LQ496H8 165 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 CFAP221Q4G0U5 840 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 C4orf48Q5BLP8 95 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 USP50Q70EL3 339 aaPredicted RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 DZIP1Q86YF9 867 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 APOBEC3FQ8IUX4 373 aaKnown RBP4.17□□□□□ -1.74
MCF2-203ENST00000370576 CEP97Q8IW35 865 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 RDM1Q8NG50 284 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 TGFBRAP1Q8WUH2 860 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 LMBR1Q8WVP7 490 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 CCT6BQ92526 530 aa4.17□□□□□ -1.74
MCF2-203ENST00000370576 MRPS27Q92552 414 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms