RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 RWDD3Q9Y3V2 267 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 PREX2Q70Z35 1606 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 TPST1O60507 370 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 CDC40O60508 579 aaKnown RBP eCLIP12.92□□□□□ -0.34
HCFC1-202ENST00000369984 ZNF512Q96ME7 567 aaPredicted RBP12.92□□□□□ -0.34
HCFC1-202ENST00000369984 HDHD2Q9H0R4 259 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 KCTD10Q9H3F6 313 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 IARS2Q9NSE4 1012 aaKnown RBP12.92□□□□□ -0.34
HCFC1-202ENST00000369984 ADAM30Q9UKF2 790 aa12.92□□□□□ -0.34
HCFC1-202ENST00000369984 TAF4O00268 1085 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 AP1S2P56377 157 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 RPS7P62081 194 aaKnown RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 SNX17Q15036 470 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 HIST2H2ACQ16777 129 aaPredicted RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 HIST2H2AA3Q6FI13 130 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 TAF8Q7Z7C8 310 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 SEPT5Q99719 369 aaPredicted RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 NT5C1AQ9BXI3 368 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 IL18RAPO95256 599 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 TFE3P19532 575 aaPredicted RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 HSD17B3P37058 310 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 RGS2P41220 211 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 CENPCQ03188 943 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 FMR1Q06787 632 aaKnown RBP eCLIP12.91□□□□□ -0.344e-7■■■■□ 21.2
HCFC1-202ENST00000369984 MMRN1Q13201 1228 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 USP39Q53GS9 565 aaKnown RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 CYB5D1Q6P9G0 228 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 KDM6BO15054 1643 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 SOAT2O75908 522 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 NCAM1P13591 858 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 ACADSBP45954 432 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 ARF5P84085 180 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 PGS1Q32NB8 556 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 CYP4A22Q5TCH4 519 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 KLHL17Q6TDP4 642 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 C4orf22Q6V702 233 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 MAGEB18Q96M61 343 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 METTL5Q9NRN9 209 aaKnown RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 DDHD2O94830 711 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 GSTM1P09488 218 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 MYBP10242 640 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 FLT3P36888 993 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 CORO7P57737 925 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 RBBP8NLQ8NC74 664 aaPredicted RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 PIGBQ92521 554 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 SH3BP1Q9Y3L3 701 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 PALLDQ8WX93 1383 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 VWA5AO00534 786 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 KCNJ6P48051 423 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 HARS2P49590 506 aaKnown RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 CDC16Q13042 620 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 PKN2Q16513 984 aaKnown RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 GOLGA7BQ2TAP0 167 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 KIFC1Q9BW19 673 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 INTS13Q9NVM9 706 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 TRMT6Q9UJA5 497 aaKnown RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 FHOD1Q9Y613 1164 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 PLEKHG2Q9H7P9 1386 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 HEATR9A2RTY3 570 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 TALDO1P37837 337 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 SARSP49591 514 aaKnown RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 SEC24CP53992 1094 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 PHTF1Q9UMS5 762 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 PIPSLA2A3N6 862 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 H7C0S8 307 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 CD4P01730 458 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 STAT5BP51692 787 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 CCZ1BP86790 482 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 CCZ1P86791 482 aaPredicted RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 NFIL3Q16649 462 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 ARID3BQ8IVW6 561 aaPredicted RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 CLEC4MQ9H2X3 399 aaPredicted RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 PIGUQ9H490 435 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 RUVBL2Q9Y230 463 aaKnown RBP12.91□□□□□ -0.34
HCFC1-202ENST00000369984 VPS9D1Q9Y2B5 631 aa12.91□□□□□ -0.34
HCFC1-202ENST00000369984 GLI2P10070 1586 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 BCORL1Q5H9F3 1711 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 ALDH1A2O94788 518 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 GPD1P21695 349 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 HOXD10P28358 340 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 PTGER2P43116 358 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 PTGISQ16647 500 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 USP38Q8NB14 1042 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 FAM111AQ96PZ2 611 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 IPPQ9Y573 584 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 NQO1P15559 274 aaKnown RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 SPP2Q13103 211 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 HEY2Q9UBP5 337 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 TUBGCP4Q9UGJ1 667 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 HECW2Q9P2P5 1572 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 CFAP99D6REC4 459 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 CCT3P49368 545 aaKnown RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 CDC42EP1Q00587 391 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 CRYMQ14894 314 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 CLEC4GQ6UXB4 293 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 C1orf131Q8NDD1 294 aaKnown RBP12.9□□□□□ -0.34
HCFC1-202ENST00000369984 MCRS1Q96EZ8 462 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 VMP1Q96GC9 406 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 PEX5P50542 639 aa12.9□□□□□ -0.34
HCFC1-202ENST00000369984 ARMC6Q6NXE6 501 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms